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Displaying 601-700 of 2,876 Publications

2018

Wilson, J.M., S.Y. Litvin, and J.M. Beman. 2018. Microbial community networks associated with variations in community respiration rates during upwelling in nearshore Monterey Bay, California.. Environmental Microbiology Reports, 10: 272–282. https://doi.org/10.1111/1758-2229.12635

Woodson, C.B., F. Micheli, C.A. Boch, M. Al-Najjar, A. Espinoza, A. Hernandez, L. Vazquez-Vera, A. Saenz-Arroyo, S.G. Monismith, and J. Torre. 2018. Harnessing marine microclimates for climate change adaptation and marine conservation. Conservation Letters, e12609. https://doi.org/10.1111/conl.12609

Zurowietz, M., D. Langenkämper, B. Hosking, H.A. Ruhl, and T.W. Nattkemper. 2018. MAIA—a machine learning assisted image annotation method for environmental monitoring and exploration. PLoS ONE, 13: e0207498. https://doi.org/10.1371/journal.pone.0207498

2017

Andruszkiewicz, E.A., H.A. Starks, F.P. Chavez, L.M. Sassoubre, B.A. Block, and A.B. Boehm. 2017. Biomonitoring of marine vertebrates in Monterey Bay using eDNA metabarcoding. PLoS One, 12: e0176343. http://dx.doi.org/10.1371/journal.pone.0176343

Barry, J.P., D. Graves, C. Kecy, C. Lovera, C. Okuda, C.A. Boch, and J.P. Lord. 2017. Chasing the future: How will ocean change affect marine life? Oceanography, 30: 60–71. https://doi.org/10.5670/oceanog.2017.424

Benoit-Bird, K.J., M.A. Moline, and B. Southall. 2017. Prey in oceanic sound scattering layers organize to get a little help from their friends. Limnology and Oceanography, 62: 2788–2798. http://doi.org/10.1002/lno.10606

Bowers, H.A., J. Ryan, R. Marin III, J.M. Birch, and C.A. Scholin. 2017. Sandwich hybridization probes for the detection of Pseudo-nitzschia (Bacillariophyceae) species: An update to existing probes and a description of new probes Harmful Algae, 70: 37–51. https://doi.org/10.1016/j.hal.2017.10.005    

Brewer, P.G., and E.T. Peltzer. 2017. Depth perception: the need to report ocean biogeochemical rates as functions of temperature, not depth. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, 375(2102): 1–18. https://doi.org/10.1098/rsta.2016.0319

Brewer, P.G., E.T. Peltzer, P.M. Walz, and W.J. Kirkwood. 2017. Creating the art of deep-sea experimental chemistry with MBARI ROVs. Oceanography, 30: 48–59. https://doi.org/10.5670/oceanog.2017.423

Briggs, E.M., E. Sandoval, S. Erten, Y. Takeshita, A.C. Kummel, and T.R. Martz. 2017. Solid State Sensor for Simultaneous Measurement of Total Alkalinity and pH of Seawater. ACS Sensors, 2: 1302–1309. http://doi.org/10.1021/acssensors.7b00305

Burridge, A.K., C. Hornlein, A.W. Janssen, M. Hughes, S.L. Bush, F. Marletaz, R. Gasca, A.C. Pierrot-Bults, E. Michel, J.A. Todd, J.R. Young, K.J. Osborn, S.B.J. Menken, and K.T.C.A. Peijnenburg. 2017. Time-calibrated molecular phylogeny of pteropods. PLoS One, 12: e0177325. http://dx.doi.org/10.1371/journal.pone.0177325

Burton, E.J., L.A. Kuhnz, A.P. DeVogelaere, and J.P. Barry. 2017. Sur Ridge Field Guide: Monterey Bay National Marine Sanctuary. Marine Sanctuaries Conservation Series ONMS-17-10. U.S. Department of Commerce. National Oceanic and Atmospheric Administration, Office of National Marine Sanctuaries, Silver Spring, MD: 122.

Caron, D.A., A.G. Gellene, J. Smith, E.L. Seubert, V. Campbell, G.S. Sukhatme, B. Seegers, B.H. Jones, A.A.Y. Lie, R. Terrado, M.D.A. Howard, R.M. Kudela, K. Hayashi, J. Ryan, J. Birch, E. Demir-Hilton, K. Yamahara, C. Scholin, M. Mengel, and G. Robertson. 2017. Response of phytoplankton and bacterial biomass during a wastewater effluent diversion into nearshore coastal waters. Estuarine, Coastal and Shelf Science, 186: 223–236. http://dx.doi.org/10.1016/j.ecss.2015.09.013

Carter, B.R., R.A. Feely, N.L. Williams, A.G. Dickson, M.B. Fong, and Y. Takeshita. 2017. Updated Methods for Global Locally Interpolated Estimation of Alkalinity, pH, and Nitrate. Limnology and Oceanography: Methods, 16: 119–131. https://doi.org/10.1002/lom3.10232

Chavez, F.P., J. Sevadjian, C. Wahl, J. Friederich, and G.E. Friederich. 2017. Measurements of pCO2 and pH from an autonomous surface vehicle in a coastal upwelling system. Deep Sea Research Part II: Topical Studies in Oceanography, 151: 137–146. http://dx.doi.org/10.1016/j.dsr2.2017.01.001

Chavez, F.P., J.T. Pennington, R.P. Michisaki, M. Blum, G.M. Chavez, J. Friederich, B. Jones, B. Herlien, B. Kieft, B. Hobson, A.S. Ren, J. Ryan, J.C. Sevadjian, C. Wahl, K.R. Walz, K. Yamahara, G.E. Friederich, and M. Messié. 2017. Climate variability and change: Response of a coastal ocean ecosystem. Oceanography, 30: 128–145. https://doi.org/10.5670/oceanog.2017.429

Chavez, F.P., P.G. Brewer, and C.A. Scholin. 2017. Celebrating 30 years of ocean science technology at the Monterey Bay Aquarium Research Institute. Oceanography, 30: 18–25. https://doi.org/10.5670/oceanog.2017.420

Choi, C.J., C. Bachy, G.S. Jaeger, C. Poirier, L. Sudek, V.V.S.S. Sarma, A. Mahadeva, S.J. Giovannoni, and A.Z. Worden. 2017. Newly discovered deep-branching marine plastid lineages are numerically rare but globally distributed. Current Biology, 27: R15-R16. http://dx.doi.org/10.1016/j.cub.2016.11.032

Choy, C.A., S.H.D. Haddock, and B.H. Robison. 2017. Deep pelagic food web structure as revealed by in situ feeding observations. Proc Biol Sci, 284: 1–10. http://doi.org/10.1098/rspb.2017.2116

Clague, D.A., J.B. Paduan, D.W. Caress, W.W. Chadwick Jr., M. Le Saout, B. Dreyer, and R.A. Portner. 2017. High-resolution AUV mapping and targeted ROV observations of three historical lava flows at Axial Seamount. Oceanography, 30: 82–99. http://doi.org/10.5670/oceanog.2017.426

Clayton, S., Y.C. Lin, M.J. Follows, and A.Z. Worden. 2017. Co-existence of distinct Ostreococcus ecotypes at an oceanic front. Limnology and Oceanography, 62: 75–88. http://dx.doi.org/10.1002/lno.10373

Covault, J.A., S. Kostic, C.K. Paull, Z. Sylvester, and A. Fildani. 2017. Cyclic steps and related supercritical bedforms: Building blocks of submarine fans and canyon-channel systems, Western North America. Marine Geology, 393: 4–20. http://dx.doi.org/10.1016/j.margeo.2016.12.009

Cuvelier, M.L., J. Guo, A.C. Ortiz, M.J. van Baren, M.A. Tariq, F. Partensky, and A.Z. Worden. 2017. Responses of the picoprasinophyte Micromonas commoda to light and ultraviolet stress. PLoS One, 12: e0172135. http://dx.doi.org/10.1371/journal.pone.0172135

Duffy, L.M., P. Kuhnert, H.R. Pethybridge, J.W. Young, R.J. Olson, J.M. Logan, N. Goñi, E. Romanov, V. Allain, M. Staudinger, M. Abecassis, C.A. Choy, A.J. Hobday, M. Simier, F. Galván-Magaña, M. Potier, and F. Ménard. 2017. Global trophic ecology of yellowfin, bigeye, and albacore tunas: understanding predation on micronekton communities at ocean-basin scales. Deep Sea Research Part II Topical Studies in Oceanography, 140: 55–73. http://dx.doi.org/10.1016/j.dsr2.2017.03.003

Fassbender, A.J., C.L. Sabine, and H.I. Palevsky. 2017. Nonuniform ocean acidification and attenuation of the ocean carbon sink. Geophysical Research Letters, 44: 8404–8413. http://dx.doi.org/10.1002/2017GL074389

Fassbender, A.J., C.L. Sabine, M.F. Cronin, and A.J. Sutton. 2017. Mixed layer carbon cycling at the Kuroshio Extension Observatory. Global Biogeochemical Cycles, 31: 272–288. http://doi.org/10.1002/2016GB005547

Fassbender, A.J., H.I. Palevsky, T.R. Martz, A.E. Ingalls, M. Gledhill, S.E. Fawcett, J.A. Brandes, and L.I. Aluwihare. 2017. Perspectives on Chemical Oceanography in the 21st century: Participants of the COME ABOARD Meeting examine aspects of the field in the context of 40years of DISCO. Marine Chemistry, 196: 181–190. https://doi.org/10.1016/j.marchem.2017.09.002

Fassbender, A.J., S.R. Alin, R.A. Feely, A.J. Sutton, J.A. Newton, and R.H. Byrne. 2017. Estimating Total Alkalinity in the Washington State Coastal Zone: Complexities and Surprising Utility for Ocean Acidification Research. Estuaries and Coasts, 40: 404–418. http://doi.org/10.1007/s12237-016-0168-z

Fischer, A.M., J.P. Ryan, and E.V. Rienecker. 2017. Fine scale mapping of the structure and composition of the Elkhorn Slough (California, USA) tidal plume. Estuarine, Coastal and Shelf Science, 184: 10–20. http://dx.doi.org/10.1016/j.ecss.2016.10.035

Francis, W.R., L.M. Christianson, and S.H.D. Haddock. 2017. Symplectin evolved from multiple duplications in bioluminescent squid. PeerJ, 5: e3633. http://dx.doi.org/10.7717/peerj.3633

Goffredi, S.K., S.B. Johnson, V. Tunnicliffe, D. Caress, D. Clague, E. Escobar, L. Lundsten, J.B. Paduan, G. Rouse, D.L. Salcedo, L.A. Soto, R. Spelz-Madero, R. Zierenberg, and R. Vrijenhoek. 2017. Hydrothermal vent fields discovered in the southern Gulf of California clarify role of habitat in augmenting regional diversity. Proceedings of the Royal Society B, 284: 1–10. http://dx.doi.org/10.1098/rspb.2017.0817

Haddock, S.H.D., L.M. Christianson, W.R. Francis, S. Martini, C.W. Dunn, P.R. Pugh, C.E. Mills, K.J. Osborn, B.A. Seibel, C.A. Choy, C.E. Schnitzler, G.I. Matsumoto, M. Messié, D.T. Schultz, J.R. Winnikoff, M.L. Powers, R. Gasca, W.E. Browne, S. Johnsen, K.L. Schlining, S. von Thun, B.E. Erwin, J.F. Ryan, and E.V. Thuesen. 2017. Insights into the biodiversity, behavior, and bioluminescence of deep-sea organisms using molecular and maritime technology. Oceanography, 30: 38–47. https://doi.org/10.5670/oceanog.2017.422. PDF.

Hamilton, S.L., C.A. Logan, H.W. Fennie, S.M. Sogard, J.P. Barry, A.D. Makukhov, L.R. Tobosa, K. Boyer, C.F. Lovera, and G. Bernardi. 2017. Species-specific responses of juvenile rockfish to elevated pCO2: From behavior to genomics. PLoS One, 12: e0169670. http://dx.doi.org/10.1371/journal.pone.0169670

Harvey, J.B.J., S.B. Johnson, J.L. Fisher, W.T. Peterson, and R.C. Vrijenhoek. 2017. Comparison of morphological and next generation DNA sequencing methods for assessing zooplankton assemblages. Journal of Experimental Marine Biology and Ecology, 487: 113–126. http://dx.doi.org/10.1016/j.jembe.2016.12.002

Hoving, H.J., and S.H. Haddock. 2017. The giant deep-sea octopus Haliphron atlanticus forages on gelatinous fauna. Scientific Reports, 7: 1–4. http://dx.doi.org/10.1038/srep44952

Hoving, H.J.T., S.L. Bush, S.H.D. Haddock, and B.H. Robison. 2017. Bathyal feasting: post-spawning squid as a source of carbon for deep-sea benthic communities. Proceedings of the Royal Society B, 284: 1–5. http://doi.org/10.1098/rspb.2017.2096

Hughes, B.B., R. Beas-Luna, A.K. Barner, K. Brewitt, D.R. Brumbaugh, E.B. Cerny-Chipman, S.L. Close, K.E. Coblentz, K.L. de Nesnera, S.T. Drobnitch, J.D. Figurski, B. Focht, M. Friedman, J. Freiwald, K.K. Heady, W.N. Heady, A. Hettinger, A. Johnson, K.A. Karr, B. Mahoney, M.M. Moritsch, A.M.K. Osterback, J. Reimer, J. Robinson, T. Rohrer, J.M. Rose, M. Sabal, L.M. Segui, C. Shen, J. Sullivan, R. Zuercher, P.T. Raimondi, B.A. Menge, K. Grorud-Colvert, M. Novak, and M.H. Carr. 2017. Long-term studies contribute disproportionately to ecology and policy. BioScience, 67: 271–281. http://dx.doi.org/10.1093/biosci/biw185

Johnson, K.S., J.N. Plant, J.P. Dunne, L.D. Talley, and J.L. Sarmiento. 2017. Annual nitrate drawdown observed by SOCCOM profiling floats and the relationship to annual net community production. Journal of Geophysical Research: Oceans, 122: 6668–6683. http://dx.doi.org/10.1002/2017JC012839

Johnson, K.S., J.N. Plant, L.J. Coletti, H.W. Jannasch, C.M. Sakamoto, S.C. Riser, D.D. Swift, N.L. Williams, E. Boss, N. Haëntjens, L.D. Talley, and J.L. Sarmiento. 2017. Biogeochemical sensor performance in the SOCCOM profiling float array. Journal of Geophysical Research: Oceans, 122: 6416–6436. http://dx.doi.org/10.1002/2017JC012838

Katija, K., C.A. Choy, R.E. Sherlock, A.D. Sherman, and B.H. Robison. 2017. From the surface to the seafloor: How giant larvaceans transport microplastics into the deep sea. Science Advances, 3(8): 1–5. http://dx.doi.org/10.1126/sciadv.1700715

Katija, K., R.E. Sherlock, A.D. Sherman, and B. Robison. 2017. New technology reveals the role of giant larvaceans in oceanic carbon cycling. Science Advances, 3: e1602374. http://dx.doi.org/10.1126/sciadv.1602374

Kemp, M., and B.Y. Raanan. Actuator Fault-Detection for Autonomous Underwater Vehicles Using Unsupervised Learning. Annual Conference of the PHM Society, 9(1): 1–7. https://doi.org/10.36001/phmconf.2017.v9i1.2486

Lewis, A., and G.I. Matsumoto. "Science Educator Professional Development: Big Data and Inquiry Learning." In Optimizing STEM Education With Advanced ICTs and Simulations. edited by Levin, Ilya, and Dina Tsybulsky, 219-244. Hershey, PA: IGI Global, 2017. http://doi.org/10.4018/978-1-5225-2528-8

Lord, J.P., J.P. Barry, and D. Graves. 2017. Impact of climate change on direct and indirect species interactions. Marine Ecology Progress Series, 571: 1–11. http://dx.doi.org/10.3354/meps12148

Lord, J.P., and J.P. Barry. 2017. Juvenile mussel and abalone predation by the lined shore crab Pachygrapsus crassipes. Journal of Shellfish Research, 36: 209–213. http://dx.doi.org/10.2983/035.036.0122

Lundsten, L., H.M. Reiswig, and W.C. Austin. 2017. Three new species of Cladorhiza (Demospongiae, Poecilosclerida, Cladorhizidae) from the Northeast Pacific Ocean. Zootaxa, 4317(2): 247–260. http://dx.doi.org/10.11646/zootaxa.4317.2.3

Maier, K.L., C.K. Paull, D.S. Brothers, D.W. Caress, M. McGann, E.M. Lundsten, A. Anderson, and R. Gwiazda. 2017. Investigation of late Pleistocene and Holocene activity in the San Gregorio Fault Zone on the continental slope north of Monterey Canyon, offshore Central California. Bulletin of the Seismological Society of America, 107(3): 1094. http://dx.doi.org/10.1785/0120160261

Manning, C.C., R.H.R. Stanley, D.P. Nicholson, J.M. Smith, J.T. Pennington, M.R. Fewings, M.E. Squibb, and F.P. Chavez. 2017. Impact of recently upwelled water on productivity investigated using in situ and incubation-based methods in Monterey Bay. Journal of Geophysical Research-Oceans, 122: 1901–1926. http://dx.doi.org/10.1002/2016JC012306

Martini, S., and S.H.D. Haddock. 2017. Quantification of bioluminescence from the surface to the deep sea demonstrates its predominance as an ecological trait. Scientific Reports, 7: 1–11. http://dx.doi.org/10.1038/srep45750

McClain, C.R., J.P. Barry, and T.J. Webb. 2017. Increased Energy Differentially Increases Richness and Abundance of Optimal Body Sizes in Deep-Sea Wood-Falls. Ecology, 99(1): 184–195. https://www.jstor.org/stable/26624024

McLaughlin, K., A. Dickson, S.B.  Weisberg, K. Coale, V. Elrod, C. Hunter, K.S. Johnson, S. Kram, R. Kudela, T. Martz, K. Negrey, U. Passow, F. Shaughnessy, J.E. Smith, D. Tadesse, L. Washburn, and K.R. Weis. 2017. An evaluation of ISFET sensors for coastal pH monitoring applications. Regional Studies in Marine Science, 12: 11–18. http://dx.doi.org/10.1016/j.rsma.2017.02.008

Messié, M., and F.P. Chavez. 2017. Nutrient supply, surface currents, and plankton dynamics predict zooplankton hotspots in coastal upwelling systems. Geophysical Research Letters, 44: 8979–8986. http://dx.doi.org/10.1002/2017GL074322

Netburn, A.N., J.D. Kinsey, S.L. Bush, A. Djurhuus, J. Fernandez, C.L. Hoffman, D. McVeigh, K.I. Twing, and L. Bagge. 2017. First HOV Alvin study of the pelagic environment at Hydrographer Canyon (NW Atlantic). Deep Sea Research Part II: Topical Studies in Oceanography, 150: 30–40. https://doi.org/10.1016/j.dsr2.2017.10.001

Oju, B., E. Oka, S.P. Bishop, S. Chen, and A.J. Fassbender. 2017. Decadal variability of the Kuroshio Extension system and its impact on subtropical mode water formation. US CLIVAR Variations: Frontiers in western boundary current research, 15: 11–16. http://doi.org/10.5065/D6SJ1JB2

Olins, H.C., D.R. Rogers, C. Preston, W. Ussler III, D. Pargett, S. Jensen, B. Roman, J.M. Birch, C.A. Scholin, M.F. Haroon, and P.R. Girguis. 2017. Co-registered Geochemistry and Metatranscriptomics Reveal Unexpected Distributions of Microbial Activity within a Hydrothermal Vent Field. Frontiers in Microbiology, 8: 1–18. https://doi.org/10.3389/fmicb.2017.01042

Raanan, B.Y., J. Bellingham, Y. Zhang, M. Kemp, B. Kieft, H. Singh, and Y. Girdhar. 2017. Detection of Unanticipated Faults for Autonomous Underwater Vehicles using Online Topic Models. Journal of Field Robotics, 35(5): 705–716. https://doi.org/10.1002/rob.21771

Rodgers, K.B., P. Zhai, D. Iudicone, O. Aumont, B. Carter, A.J. Fassbender, S.M. Griffies, Y. Plancherel, L. Resplandy, R.D. Slater, and K. Toyama. 2017. Western boundary currents as conduits for the ejection of anthropogenic carbon from the thermocline. US CLIVAR Variations: Frontiers in western boundary current research, 15: 6–10. http://doi.org/10.5065/D6SJ1JB2

Ryan, J.P., J.R. Green, E. Espinoza, and A.R. Hearn. 2017. Association of whale sharks (Rhincodon typus) with thermo-biological frontal systems of the eastern tropical Pacific. PLoS ONE, 12(8): e0182599. https://doi.org/10.1371/journal.pone.0196443

Ryan, J.P., R.M. Kudela, J.M. Birch, M. Blum, H.A. Bowers, F.P. Chavez, G.J. Doucette, K. Hayashi, R. Marin III, C.M. Mikulski, T. Pennington, C.A. Scholin, G.J. Smith, A. Woods, and Y. Zhang. 2017. Causality of an extreme harmful algal bloom in Monterey Bay, California, during the 2014–2016 northeast Pacific warm anomaly. Geophysical Research Letters, 44: 5571–5579. https://doi.org/10.1002/2017GL072637

Sakamoto, C.M., K.S. Johnson, L.J. Coletti, and H.W. Jannasch. 2017. Pressure correction for the computation of nitrate concentrations in seawater using an in situ ultraviolet spectrophotometer. Limnology and Oceanography: Methods, 15(10): 897–902. http://dx.doi.org/10.1002/lom3.10209

Sakamoto, C.M., K.S. Johnson, L.J. Coletti, T.L. Maurer, G. Massion, J.T. Pennington, J.N. Plant, H.W. Jannasch, and F.P. Chavez. 2017. Hourly in situ nitrate on a coastal mooring: A 15-year record and insights into new production. Oceanography, 30: 114–127. https://doi.org/10.5670/oceanog.2017.428

Sanborn, K.L., J.M. Webster, Y. Yokoyama, A. Dutton, J.C. Braga, D.A. Clague, J.B. Paduan, D. Wagner, J.J. Rooney, and J.R. Hansen. 2017. New evidence of Hawaiian coral reef drowning in response to meltwater pulse-1A. Quaternary Science Reviews, 175: 60–72. https://doi.org/10.1016/j.quascirev.2017.08.022

Sato, M., and K.J. Benoit-Bird. 2017. Spatial variability of deep scattering layers shapes the Bahamian mesopelagic ecosystem. Marine Ecology Progress Series, 580: 69–82. https://doi.org/10.3354/meps12295

Schoening, T., J. Durden, I. Preuss, A. Branzan Albu, A. Purser, B. De Smet, C. Dominguez-Carrió, C. Yesson, D. de Jonge, D. Lindsay, J. Schulz, K.O. Möller, K. Beisiegel, L. Kuhnz, M. Hoeberechts, N. Piechaud, S. Sharuga, and T. Treibitz. 2017. Report on the Marine Imaging Workshop 2017. Research Ideas and Outcomes, 3: e13820. https://doi.org/10.3897/rio.3.e13820

Scholin, C.A., J. Birch, S. Jensen, R. Marin III, E. Massion, D. Pargett, C. Preston, B. Roman, and W. Ussler III. 2017. The quest to develop ecogenomic sensors: A 25-Year history of the Environmental Sample Processor (ESP) as a case study. Oceanography, 30: 100–113. https://doi.org/10.5670/oceanog.2017.427

Sherlock, R.E., K.R. Walz, K.L. Schlining, and B.H. Robison. 2017. Morphology, ecology, and molecular biology of a new species of giant larvacean in the eastern North Pacific: Bathochordaeus mcnutti sp. nov. Marine Biology, 164: 20. http://dx.doi.org/10.1007/s00227-016-3046-0

Smith Jr., K.L., A.D. Sherman, P.R. McGill, R.G. Henthorn, J. Ferreira, and C.L. Huffard. 2017. Evolution of monitoring an abyssal time-​series station in the northeast Pacific over 28 years. Oceanography, 30: 72–81. https://doi.org/10.5670/oceanog.2017.425

Straehler-Pohl, I., G.I. Matsumoto, and M. Acevendo. 2017. Recognition of the Californian cubozoan population as a new species – Carybdea confusa n. sp. (Cnidaria, Cubozoa, Carybdeida). Plankton and Benthos Research, 12: 129–138. http://doi.org/10.3800/pbr.12.129

Sutton, T.T., M.R. Clark, D.C. Dunn, P.N. Halpin, A.D. Rogers, J. Guinotte, S.J. Bograd, M.V. Angel, J.A.A. Perez, K. Wishner, R.L. Haedrich, D.J. Lindsay, J.C. Drazen, A. Vereshchaka, U. Piatkowski, T. Morato, K. Błachowiak-Samołyk, B.H. Robison, K.M. Gjerde, A. Pierrot-Bults, P. Bernal, G. Reygondeau, and M. Heino. 2017. A global biogeographic classification of the mesopelagic zone. Deep Sea Research Part I: Oceanographic Research Papers, 126: 85–102. http://dx.doi.org/10.1016/j.dsr.2017.05.006

Symons, W. O., E.J. Sumner, C.K. Paull, M.J.B. Cartigny, J.P. Xu, K.L. Maier, T.D. Lorenson, and P.J. Talling. 2017. A new model for turbidity current behavior based on integration of flow monitoring and precision coring in a submarine canyon. Geology, 45: 367–370. http://dx.doi.org/10.1130/G38764.1

Tagliabue, A., A.R. Bowie, P.W. Boyd, K.N. Buck, K.S. Johnson, and M.A. Saito. 2017. The integral role of iron in ocean biogeochemistry. Nature, 543: 51–59. http://dx.doi.org/10.1038/nature21058

Takeshita, Y. 2017. Understanding feedbacks between ocean acidification and coral reef metabolism. Journal of Geophyiscal Research: Oceans, 122: 1639–1642. http://doi.org/10.1002/2017JC012740

Thistle, David, L. Sedlacek, K.R. Carman, and J.P. Barry. 2017. Influence of habitat heterogeneity on the community structure of deep-sea harpacticoid communities from a canyon and an escarpment site on the continental rise off California. Deep Sea Research Part I: Oceanographic Research Papers, 123: 56–61. http://dx.doi.org/10.1016/j.dsr.2017.03.005

Thomas, K. N., B.H. Robison, and S. Johnsen. 2017. Two eyes for two purposes: in situ evidence for asymmetric vision in the cockeyed squids Histioteuthis heteropsis and Stigmatoteuthis dofleini. Philosophical Transactions B, 372: 1–9. http://dx.doi.org/10.1098/rstb.2016.0069

Thys, T.M., A.R. Hearn, K.C. Weng, J.P. Ryan, and C. Peñaherrera-Palma. 2017. Satellite tracking and site fidelity of short ocean sunfish, Mola ramsayi, in the Galapagos Islands. Journal of Marine Sciences, 2017: 1–10. https://doi.org/10.1155/2017/7097965

Webb, Thomas J., J.P. Barry, and C.R. McClain. 2017. Abundance-occupancy relationships in deep sea wood fall communities. Ecography, 40(11): 1339–1347. http://dx.doi.org/10.1111/ecog.02618

Williams, N. L., L.W. Juranek, R.A. Feely, K.S. Johnson, J.L. Sarmiento, L.D. Talley, A.G. Dickson, A.R. Gray, R. Wanninkhof, J.L. Russell, S.C. Riser, and Y. Takeshita. 2017. Calculating surface ocean pCO2 from biogeochemical Argo floats equipped with pH: An uncertainty analysis. Global Biogeochemical Cycles, 31: 591–604. http://dx.doi.org/10.1002/2016GB005541

Winnikoff, J.R., T.M. Wilson, E.V. Thuesen, and S.H.D. Haddock. 2017. Enzymes feel the squeeze: biochemical adaptation to pressure in the deep sea. The Biochemist, 39: 26–29. https://doi.org/10.1042/BIO03906026. PDF.

Zhang, D., M.F. Cronin, X. Lin, R. Inoue, A.J. Fassbender, S.P. Bishop, and A.J. Sutton. 2017. Observing air-sea interaction in the western boundary currents and their extension regions: Considerations for OceanObs'19. Frontiers in Western Boundary Current Research, 15: 23–30. http://dx.doi.org/10.5065/D6SJ1JB2

Zhang, Yanwu, B. Kieft, M.J. Stanway, R.S. McEwen, B.W. Hobson, J.G. Bellingham, J.P. Ryan, T.C. O'Reilly, B.Y. Raanan, M. Messié, J.M. Smith, and F.P. Chavez. 2017. Isotherm tracking by an autonomous underwater vehicle in drift mode. IEEE Journal of Oceanic Engineering, 42: 808–817. http://dx.doi.org/10.1109/JOE.2016.2625058

2016

Claustre, H., and K. Johnson (Biogeochemical-Argo Planning Group). The scientific rationale, design and implementation plan for a biogeochemical-Argo float array. Ifremer, 2016: 1–65. http://dx.doi.org/10.13155/46601

Anderson, C.R., R.M. Kudela, M. Kahru, Y. Chao, L.K. Rosenfeld, F.L. Bahr, D.M. Anderson, and T.A. Norris. 2016. Initial skill assessment of the California Harmful Algae Risk Mapping (C-HARM) system. Harmful Algae, 59: 1–18. http://dx.doi.org/10.1016/j.hal.2016.08.006

Aoyama, M., M. Abad, C. Anstey, P.M. Ashraf, A. Bakir, S. Becker, S. Bell, E. Berdalet, M. Blum, R. Briggs, F. Caradec, T. Cariou, M. Church, L. Coppola, M. Crump, S. Curless, M. Dai, A. Daniel, C. Davis, E. de Santis Braga, M.E. Solis, L. Ekern, D. Faber, T. Fraser, K. Gundersen, S. Jacobsen, M. Knockaert, T. Komada, M. Kralj, R. Kramer, N. Kress, S. Lainela, J. Ledesma, X. Li, J.H. Lim, M. Lohmann, C. Lonborg, K.U. Ludwichowski, C. Mahaffey, F. Malien, F. Margiotta, T. McCormack, I. Murillo, H. Nail, G. Nausch, S. Olafsdottir, J. van Ooijen, R. Paranhos, C. Payne, O. Pierre-Duplessix, G. Prove, E. Rabiller, P. Raimbault, L. Reed, C. Rees, T. Rho, R. Roman, E.M.S. Woodward, J. Sun, B. Szymczycha, S. Takatani, A. Taylor, P. Thamer, S. Torres-Valdes, K. Trahanovsky, H. Waldron, P. Walsham, L. Wang, T. Wang, L. White, T. Yoshimura, and J.Z. Zhang. 2016. IOCCP-JAMSTEC 2015 Inter-laboratory Calibration Exercise of a Certified Reference Material for Nutrients in Seawater. International Ocean Carbon Coordination Project (IOCCP), Report Number 1/2016: 176. http://dx.doi.org/10.25607/OBP-419

Barker, L.D.L., S.L. Kim, B.T. Saenz, D.J. Osborne, and K.L. Daly. 2016. Towable instrumentation for use with a hand-deployed remotely operated vehicle. Marine Technology Society / Institute of Electrical and Electronics Engineers Oceans Conference, 2016.

Barry, J.P., J.R. Taylor, L.A. Kuhnz, and A.P. De Vogelaere. 2016. Symbiosis between the holothurian Scotoplanes sp. A and the lithodid crab Neolithodes diomedeae on a featureless bathyal sediment plain. Marine Ecology, 38: e12396. http://dx.doi.org/10.1111/maec.12396

Benoit-Bird, K.J., B.L. Southall, and M.A. Moline. 2016. Predator-guided sampling reveals biotic structure in the bathypelagic. Proceedings of the Royal Society B, 283: 20152457. http://dx.doi.org/10.1098/rspb.2015.2457

Bertram, S., C. Kitts, D. Azevedo, G. Del Vecchio, B. Hopner, C.G. Wheat, and W. Kirkwood. 2016. A portable ASV prototype for shallow-water science operations. Marine Technology Society / Institute of Electrical and Electronics Engineers Oceans Conference, 2016.

Bowers, H.A., R. Marin III, J.M. Birch, C.A. Scholin, and G.J. Doucette. 2016. Recovery and identification of Pseudo-nitzschia (Bacillariophyceae) frustules from natural samples acquired using the environmental sample processor. Journal of Phycology, 52: 135–140. http://dx.doi.org/10.1111/jpy.12369

Branham, C.W., D. Murphy, K. Johnson, and H. Jannasch. 2016. Optimization of a robust and reliable ISFET sensor for measuring pH in the deep ocean. Marine Technology Society / Institute of Electrical and Electronics Engineers Oceans Conference, 2016: 1–4. http://dx.doi.org/10.1109/OCEANS.2016.7761357

Breusing, C., A. Biastoch, A. Drews, A. Metaxas, D. Jollivet, R.C. Vrijenhoek, T. Bayer, F. Melzner, L. Sayavedra, J.M. Petersen, N. Dubilier, M.B. Schilhabel, P. Rosenstiel, and T.B. Reusch. 2016. Biophysical and population genetic models predict the presence of “phantom” stepping stones connecting Mid-Atlantic Ridge vent ecosystems. Current Biology, 26: 2257–2267. http://dx.doi.org/10.1016/j.cub.2016.06.062

Brewer, P.G., and E.T. Peltzer. 2016. Ocean chemistry, ocean warming, and emerging hypoxia: Commentary. Journal of Geophysical Research-Oceans, 121: 3659–3667. http://dx.doi.org/10.1002/2016jc011651

Bruno, B., J. Wren, J. Ayau, S. Leon Soon, H. Needham, K. Noa, E. Wood-Charlson, and A. Choy. 2016. Summer Bridge Program establishes nascent pipeline to expand and diversify Hawaii’s Undergraduate Geoscience enrollment. Oceanography, 29: 286–292. http://dx.doi.org/10.5670/oceanog.2016.33