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2014

Secretariat of the Convention on Biological Diversity (J.P. Barry was a lead author). 2014. An Updated Synthesis of the Impacts of Ocean Acidification on Marine Biodiversity. CBD Technical Series No. 75: 1–99. https://news-oceanacidification-icc.org/2014/10/08/an-updated-synthesis-of-the-impacts-of-ocean-acidification-on-marine-biodiversity-secretariat-of-the-convention-on-biological-diversity/

Sigman, M., R. Dublin, A. Anderson, N. Deans, J. Warburton, G.I. Matsumoto, D. Dugan, and J. Harcharek. 2014. Using large marine ecosystems and cultural responsiveness as the context for professional development of teachers and scientists in ocean sciences. Journal of Geoscience Education, 62: 25–40. http://dx.doi.org/10.5408/12-403.1

Sinton, J.M., D.E. Eason, M. Tardona, D. Pyle, I. van der Zander, H. Guillou, D.A. Clague, and J.J. Mahoney. 2014. Ka'ena Volcano–A precursor volcano on the island of O'ahu, Hawai'i. Geological Society of America, 126: 1219–1244. http://dx.doi.org/10.1130/B30936.1

Smith Jr., K.L., A.D. Sherman, C.L. Huffard, P.R. McGill, R. Henthorn, S. Von Thun, H.A. Ruhl, M. Kahru, and M.D. Ohman. 2014. Large salp bloom export from the upper ocean and benthic community response in the abyssal northeast Pacific: Day to week resolution. Limnology and Oceanography, 59: 745–757. http://dx.doi.org/10.4319/lo.2014.59.3.0745

Smith, J.M., A.C. Mosier, and C.A. Francis. 2014. Spatiotemporal relationships between the abundance, distribution, and potential activities of ammonia-oxidizing and denitrifying microorganisms in intertidal sediments. Microbial Ecology, 69: 13–24. https://doi.org/10.1007/s00248-014-0450-1

Smith, J.M., K.L. Casciotti, F.P. Chavez, and C.A. Francis. 2014. Differential contributions of archaeal ammonia oxidizer ecotypes to nitrification in coastal surface waters. ISME Journal, 8: 1704–1714. http://dx.doi.org/10.1038/ismej.2014.11

Stanway, M.J., B. Kieft, T. Hoover, B. Hobson, A. Hamilton, and J.G. Bellingham. 2014. Acoustic tracking and homing with a long-range AUV. Proceedings of Marine Technology Society/Institute for Electrical and Electronics Engineers Oceans 2014, St. John's, CAN, 14–19 September 2014: 1–7. http://dx.doi.org/10.1109/OCEANS.2014.7003277

Stevenson, C.J., P.J. Talling, D.G. Masson, E.J. Sumner, M. Frenz, and R.B. Wynn. 2014. The spatial and temporal distribution of grain-size breaks in turbidites. Sedimentology, 61: 1120–1156. http://dx.doi.org/10.1111/sed.12091

Stevenson, C.J., P.J. Talling, E.J. Sumner, D.G. Masson, M. Frenz, and R.B. Wynn. 2014. On how thin submarine flows transported large volumes of sand for hundreds of kilometres across a flat basin plain without eroding the sea floor. Sedimentology, 61: 1982–2019. http://dx.doi.org/10.1111/sed.12125

Stewart, J.S., E.L. Hazen, S.J. Bograd, J.E.K. Byrnes, D.G. Foley, W.F. Gilly, B.H. Robison, and J.C. Field. 2014. Combined climate- and prey-mediated range expansion of Humboldt squid (Dosidicus gigas), a large marine predator in the California Current System. Global Change Biology, 20: 1832–1843. http://dx.doi.org/10.1111/gcb.12502

Sudek, S., R.C. Everroad, A.M. Gehman, J.M. Smith, C.L. Poirier, F.P. Chavez, and A.Z. Worden. 2014. Cyanobacterial distributions along a physico-chemical gradient in the Northeastern Pacific Ocean. Environmental Microbiology, 17(10): 3692–3707. http://dx.doi.org/10.1111/1462-2920.12742

Sumner, E.J., and C.K. Paull. 2014. Swept away by a turbidity current in Mendocino submarine canyon, California. Geophysical Research Letters, 41: 7611–7618. http://dx.doi.org/10.1002/2014GL061863

Sumner, E.J., J. Peakall, R.M. Dorrell, D.R. Parsons, S.E. Darby, R.B. Wynn, S.D. McPhail, J. Perrett, A. Webb, and D. White. 2014. Driven around the bend: Spatial evolution and controls on the orientation of helical bend flow in a natural submarine gravity current. Journal of Geophysical Research: Oceans, 119: 898–913. http://dx.doi.org/10.1002/2013JC009008

Sutton, A.J., R.A. Feely, C.L. Sabine, M.J. McPhaden, T. Takahashi, F.P. Chavez, G.E. Friederich, and J.T. Mathis. 2014. Natural variability and anthropogenic change in equatorial Pacific surface ocean pCO2 and pH. Global Biogeochemical Cycles, 28: 131–145. http://dx.doi.org/10.1002/2013GB004679

Takano, Y., T. Ito, C. Deutsch, and K.S. Johnson. 2014. Interpreting intraseasonal variability of subsurface tracers observed by a profiling float. Journal of Geophysical Research: Oceans, 119: 288–296. http://dx.doi.org/10.1002/2013JC009290

Takeshita, Y., T.R. Martz, K.S. Johnson, and A.G. Dickson. 2014. Characterization of an ion sensitive field effect transistor and chloride ion selective electrodes for pH measurements in seawater. Analytical Chemistry, 86: 11189–11195. http://dx.doi.org/10.1021/ac502631z

Taylor, J.R., A.P. DeVogelaere, E.J. Burton, O. Frey, L. Lundsten, L.A. Kuhnz, P.J. Whaling, C. Lovera, K.R. Buck, and J.P. Barry. 2014. Deep-sea faunal communities associated with a lost intermodal shipping container in the Monterey Bay National Marine Sanctuary, CA. Marine Pollution Bulletin, 83: 92–106. http://dx.doi.org/10.1016/j.marpolbul.2014.04.014

Taylor, J.R., C. Lovera, P.J. Whaling, K.R. Buck, E.F. Pane, and J.P. Barry. 2014. Physiological effects of environmental acidification in the deep-sea urchin Strongylocentrotus fragilis. Biogeosciences, 11: 1413–1423. https://doi.org/10.5194/bg-11-1413-2014

Timmerman, A.H.V., M.A. McManus, O.M. Cheriton, R.K. Cowen, A.T. Greer, R.M. Kudela, K. Ruttenberg, and J. Sevadjian. 2014. Hidden thin layers of toxic diatoms in a coastal bay. Deep Sea Research II, 101: 129–140. http://dx.doi.org/10.1016/j.dsr2.2013.05.030

Waldman, C., J. Del Rio, D. Toma, T. O'Reilly, and J. Pearlman. 2014. Intelligent sensors–Why they are so important for future ocean observing systems. Proceedings of Sensor Systems for a Changing Ocean 2014 IEEE, 2014: 1–5. http://dx.doi.org/10.1109/SSCO.2014.7000378

Walz, K.R., D.A. Clague, J.P. Barry, and R.C. Vrijenhoek. 2014. First records and range extensions for two Acesta clam species (Bivalvia: Limidae) in the Gulf of California, Mexico. Marine Biodiversity Records, 7: e60. http://dx.doi.org/10.1017/S1755267214000165

Walz, P., E.T. Peltzer, R. Gwiazda, K. Anderson, C.K. Paull, and P.G. Brewer. 2014. In situ and laboratory Raman observations of an oil associated gas hydrate in the Eel River Basin. Proceedings of the Eighth International Conference on Gas Hydrates, Beijing, 28 July–1 August 2014.

Wilson, G., D.A. Aruliah, C.T. Brown, N.P.C. Hong, M. Davis, R.T. Guy., S.H.D. Haddock, K.D. Huff, I.M. Mitchell, M.D. Plumbley, B. Waugh, E.P. White, and P. Wilson. 2014. Best practices for scientific computing. PLoS Biology, 12: e1001745. http://dx.doi.org/10.1371/journal.pbio.1001745

Wynn, R.B., V.A.I. Huvenne, T.P. Le Bas, B.J. Murton, D.P. Connelly, B.J. Bett, H.A. Ruhl, K.J. Morris, J. Peakall, D.R. Parsons, E.J. Sumner, S.E. Darby, R.D. Dorrell, and J.E. Hunt. 2014. Autonomous underwater vehicles (AUVs): Their past, present and future contributions to the advancement of marine geoscience. Marine Geology, 352: 451–468. http://dx.doi.org/10.1016/j.margeo.2014.03.012

Xu, G., S. Huang, F.A. Frey, J. Blichert-Toft, W. Abouchami, D.A. Clague, B. Cousens, J.G. Moore, and M.H. Beeson. 2014. The distribution of geochemical heterogeneities in the source of Hawaiian shield lavas as revealed by a transect across the strike of the Loa and Kea spatial trends: East Molokai to West Molokai to Penguin Bank. Geochimica et Cosmochimica Acta, 132: 214–237. http://dx.doi.org/10.1016/j.gca.2014.02.002

Zhang, H., J.B. Geller, and R.C. Vrijenhoek. 2014. Genetic diversity in native and introduced populations of the amethyst gem clam Gemma gemma (Totten, 1834) from the U.S. east and west coasts. Biological Invasions, 16: 2725–2735. http://dx.doi.org/10.1007/s10530-014-0699-9

2013

Ascani, F., K.J. Richards, E. Firing, S. Grant, K.S. Johnson, Y. Jia, R. Lukas, and D.M. Karl. 2013. Physical and biological controls of nitrate concentrations in the upper subtropical North Pacific Ocean. Deep Sea Research II, 93: 119–134. http://dx.doi.org/10.1016/j.dsr2.2013.01.034

Barry, J.P., K.R. Buck, C. Lovera, P.G. Brewer, B.A. Seibel, J.C. Drazen, M.N. Tamburri, P.J. Whaling, L. Kuhnz, and E.F. Pane. 2013. The response of abyssal organisms to low pH conditions during a series of CO2-release experiments simulating deep-sea carbon sequestration. Deep Sea Research II, 92: 249–260. http://dx.doi.org/10.1016/j.dsr2.2013.03.037

Berdalet, E., M.A. McManus, O.N. Ross, H. Burchard, F.P. Chavez, J.S. Jaffe, I.R. Jenkinson, R. Kudela, I. Lips, U. Lips, A. Lucas, D. Rivas, R.M.C. la Torre, J. Ryan, J.M. Sullivan, and H. Yamazaki. 2013. Understanding harmful algae in stratified systems: Review of progress and future directions. Deep Sea Research II, 101: 4–20. http://dx.doi.org/10.1016/j.dsr2.2013.09.042

Bernstein, M., R. Graham, D. Cline, J.M. Dolan, and K. Rajan. 2013. Learning-based event response for marine robotics. Proceedings of the Institute of Electrical and Electronics Engineers/Robotic Society of Japan International Conference on Intelligent Robots and Systems, 2013: 3362–2267. http://dx.doi.org/10.1109/IROS.2013.6696835

Borowski, W.S., N.M. Rodriguez, C.K. Paull, and W. Ussler III. 2013. Are 34S-enriched authigenic sulfide minerals a proxy for elevated methane flux and gas hydrates in the geologic record?. Marine and Petroleum Geology, 43: 381–395. https://doi.org/10.1016/j.marpetgeo.2012.12.009

Buck, K.R., J.P. Barry, and S.J. Hallam. 2013. Thioploca spp. sheaths as niches for bacterial and protistan assemblages. Marine Ecology, 35: 395–400. http://dx.doi.org/10.1111/maec.12076

Chadwick Jr., W.W., D.A. Clague, R.W. Embley, M.R. Perfit, D.A. Butterfield, D.W. Caress, J.B. Paduan, J.F. Martin, P. Sasnett, S.G. Merle, and A.M. Bobbitt. 2013. The 1998 eruption of Axial Seamount: New insights on submarine lava flow emplacement from high-resolution mapping. Geochemistry, Geophysics, Geosystems, 14: 3939–3968. http://dx.doi.org/10.1002/ggge.20202

Clague, D., B.M. Dreyer, J.B. Paduan, J.F. Martin, W.W. Chadwick, D.W. Caress, R.A. Portner, T.P. Guilderson, M.L. McGann, H. Thomas, D.A. Butterfield, and R.W. Embley. 2013. Geologic history of the summit of Axial Seamount, Juan de Fuca Ridge. Geochemistry, Geophysics, Geosystems, 14: 4403–4443. http://dx.doi.org/10.1002/ggge.20240

Das, J., J. Harvey, F. Py, H. Vathsangam, R. Graham, K. Rajan, and G.S. Sukhatme. 2013. Hierarchical probabilistic regression for AUV-based adaptive sampling of marine phenomena. Proceedings of the 2013 Institute for Electrical and Electronics Engineers International Conference on Robotics and Automation, San Diego, 23–26 September 2013.

Dorrell, R.M., S.E. Darby, J. Peakall, E.J. Sumner, D.R. Parsons, and R.B. Wynn. 2013. Superelevation and overspill control secondary flow dynamics in submarine channels. Journal of Geophysical Research: Oceans, 118: 3895–3915. http://dx.doi.org/10.1002/jgrc.20277

Dreyer, B.M., D.A. Clague, and J.B. Gill. 2013. Petrological variability of recent magmatism at the Axial Seamount summit, Juan de Fuca Ridge. Geochemistry, Geophysics, Geosystems, 14: 4306–4333. http://dx.doi.org/10.1002/ggge.20239

Duffy, G.A., L. Lundsten, L.A. Kuhnz, and C.K. Paull. 2014. A comparison of megafaunal communities in five submarine canyons off Southern California, USA. Deep Sea Research II, 104: 259–266. http://dx.doi.org/10.1016/j.dsr2.2013.06.002

Francis, W.R., L.M. Christianson, R. Kiko, M.L. Powers, N.C. Shaner, and S.H.D. Haddock. 2013. A comparison across non-model animals suggests an optimal sequencing depth for de novo transcriptome assembly. BMC Genomics, 14: 167. http://dx.doi.org/10.1186/1471-2164-14-167

Frolov, S., R.M. Kudela, and J.G. Bellingham. 2013. Monitoring of harmful algal blooms in the era of diminishing resources: A case study of the U.S. West Coast. Harmful Algae, 21–22: 1–12. http://dx.doi.org/10.1016/j.hal.2012.11.001

Gierach, M.M., M. Messié, T. Lee, K.B. Karnauskas, and M.H. Radenac. 2013. Biophysical responses near equatorial islands in the Western Pacific Ocean during El Niño/La Niña transitions. Geophysical Research Letters, 40: 5473–5479. http://dx.doi.org/10.1002/2013GL057828

Gomes, K., D. Cline, D. Edgington, M. Godin, T. Maughan, M. McCann, T. O'Reilly, F. Bahr, F. Chavez, M. Messié, J. Das, and K. Rajan. 2013. ODSS: A decision support system for ocean exploration. Proceedings of the Workshop on Data-Driven Decision Guidance and Support Systems (DGSS), 29th Institute of Electrical and Electronics Engineers International Conference on Data Engineering 2013, Brisbane, QLD, Australia, 8–12 April 2013.

Hanif, A.W., W.D. Dyson, H.A. Bowers, J.S. Pitula, G.A. Messick, R. Jagus, and E.J. Schott. 2013. Variation in spatial and temporal incidence of the crustacean pathogen Hematodinium perezi in environmental samples from Atlantic coastal bays. Aquatic Biosystems, 9(11): 1–13. http://dx.doi.org/10.1186/2046-9063-9-11

Hariganeya, N., Y. Tanimoto, H. Yamaguchi, T. Nishimura, W. Tawong, H. Sakanari, T. Yoshimatsu, S. Sato, C.M. Preston, and M. Adachi. 2013. Quantitative PCR method for enumeration of cells of cryptic species of the toxic marine dinoflagellate Ostreopsis spp. in coastal waters of Japan. PLoS ONE, 8: e57627. http://dx.doi.org/10.1371/journal.pone.0057627

Harvey, J.B.J., A.F. Djunaedi, and R.C. Vrijenhoek. 2013. Validation of a sandwich hybridization assay for marine copepod detection. Journal of Experimental Marine Biology and Ecology, 446: 306–310. http://dx.doi.org/10.1016/j.jembe.2013.06.005

Helo, C., D.A. Clague, D.B. Dingwell, and J. Stix. 2013. High and highly variable cooling rates during pyroclastic eruptions on Axial Seamount, Juan de Fuca Ridge. Journal of Volcanology and Geothermal Research, 253: 54–64. http://dx.doi.org/10.1016/j.jvolgeores.2012.12.004

Hofmann, A.F., E.T. Peltzer, and P.G. Brewer. 2013. Kinetic bottlenecks to chemical exchange rates for deep-sea animals – Part 2: Carbon dioxide. Biogeosciences, 10: 2409–2425. http://dx.doi.org/10.5194/bg-10-2409-2013

Hofmann, A.F., E.T. Peltzer, and P.G. Brewer. 2013. Kinetic bottlenecks to respiratory exchange rates in the deep sea–Part 1: Oxygen. Biogeosciences, 10: 5049-5060. https://doi.org/10.5194/bg-10-5049-2013

Hofmann, A.F., P.M. Walz, H. Thomas, E.T. Peltzer, and P.G. Brewer. 2013. High-resolution topography-following chemical mapping of ocean hypoxia by use of an autonomous underwater vehicle: The Santa Monica Basin example. Journal of Atmospheric and Oceanic Technology, 30: 2630–2646. http://dx.doi.org/10.1175/JTECH-D-12-00249.1

Hoving, H.J.T., L.D. Zeidberg, M.C. Benfield, S.L. Bush, B.H. Robison, and M. Vecchione. 2013. First in situ observations of the deep-sea squid Grimalditeuthis bonplandi reveal unique use of tentacles. Proceedings of the Royal Society B, 280: 20131463. http://dx.doi.org/10.1098/rspb.2013.1463

Hoving, H.J.T., W.F. Gilly, U. Markaida, K.J. Benoit-Bird, Z.W. Brown, P. Daniel, J.C. Field, L. Parassenti, B. Liu, and B. Campos. 2013. Extreme plasticity in life-history strategy allows a migratory predator (jumbo squid) to cope with a changing climate. Global Change Biology, 19: 2089–2103. http://dx.doi.org/10.1111/gcb.12198

Hughes, B.B., R. Eby, E. Van Dyke, M.T. Tinker, C.I. Marks, K.S. Johnson, and K. Wasson. 2013. Recovery of a top predator mediates negative eutrophic effects on seagrass. Proceedings of the National Academy of Sciences, 110: 15313–15318. http://dx.doi.org/10.1073/pnas.1302805110

Hurt, C., S.H.D. Haddock, and W.E. Browne. 2013. Molecular phylogenetic evidence for the reorganization of the Hyperiid amphipods, a diverse group of pelagic crustaceans. Molecular Phylogenetics and Evolution, 67: 28–37. http://dx.doi.org/10.1016/j.ympev.2012.12.021

Jamieson, J.W., M.D. Hannington, D.A. Clague, D.S. Kelley, J.R. Delaney, J.F. Holden, M.K. Tivey, and L.E. Kimpe. 2013. Sulfide geochronology along the Endeavour Segment of the Juan de Fuca Ridge. Geochemistry, Geophysics, Geosystems, 14: 2084–2099. http://dx.doi.org/10.1002/ggge.20133

Jeffreys, R.M., C. Burke, A.J. Jamieson, B.E. Narayanaswamy, H.A. Ruhl, K.L. Smith Jr., and U. Witte. 2013. Feeding preferences of abyssal macrofauna inferred from in situ pulse chase experiments. PLoS ONE, 8: e80510. http://dx.doi.org/10.1371/journal.pone.0080510

Johnson, K.S., L.J. Coletti, H.W. Jannasch, C.M. Sakamoto, D.D. Swift, and S.C. Riser. 2013. Long-term nitrate measurements in the ocean using the In Situ Ultraviolet Spectrophotometer: Sensor integration into the APEX profiling float. Journal of Atmospheric and Oceanic Technology, 30: 1854–1866. http://dx.doi.org/10.1175/JTECH-D-12-00221.1

Johnson, S.B., Y.J. Won, J.B.J. Harvey, and R.C. Vrijenhoek. 2013. A hybrid zone between Bathymodiolus mussel lineages from eastern Pacific hydrothermal vents. BMC Evolutionary Biology, 13: 21. http://dx.doi.org/10.1186/1471-2148-13-21

Kahn, A.S., J.B. Geller, H.M. Reiswig, and K.L. Smith Jr. 2013. Bathydorus laniger and Docosaccus maculatur (Lyssacinosida; Hexactinellida): Two new species of glass sponge from the abyssal eastern North Pacific Ocean. Zootaxa, 3646: 386–400. http://dx.doi.org/10.11646/zootaxa.3646.4.4

Kannberg, P.K., A.M. Tréhu, S.D. Pierce, C.K. Paull, and D.W. Caress. 2013. Temporal variation of methane flares in the ocean above Hydrate Ridge, Oregon. Earth and Planetary Science Letters, 368: 33–42. http://dx.doi.org/10.1016/j.epsl.2013.02.030

Kecy, C.D., E.T. Peltzer, P.M. Walz, K. Headley, R.A. Herlien, T. Maughan, G.I. Matsumoto, T.C. O'Reilly, K.A. Salamy, F. Shane, C. Lovera, J. Scholfield, W. Kirkwood, J.P. Barry, and P.G. Brewer. 2013. Open source instrumentation nodes for the greater oceanographic community. Proceedings of Marine Technology Society/Institute for Electrical and Electronics Engineers Oceans 2013, San Diego, 23–26 September 2013.

Kim, T.W., J.P. Barry, and F. Micheli. 2013. The effects of intermittent exposure to low pH and oxygen conditions on survival and growth of juvenile red abalone. Biogeosciences Discussions, 10: 3559–3576. http://dx.doi.org/10.5194/bgd-10-3559-2013

Kirkwood, W.J., E. Peltzer, P. Walz, K. Headley, C. Kecy, F. Shane, J. Scholfield, T. O'Reilly, T. Maughan, K. Salamy, and P.G. Brewer. 2013. xFOCE: An open source technology consortium for ocean acidification research. Proceedings of the 2013 Institute of Electrical and Electronics Engineers International Underwater Technology Symposium, 2013: 4–9. http://dx.doi.org/10.1109/UT.2013.6519808

Laguione-Marchais, C., D.S.M. Billett, G.L.D. Paterson, H.A. Ruhl, E.H. Soto, K.L. Smith Jr., and S. Thatje. 2013. Interannual dynamics of abyssal polychaete communities in the North East Pacific and North East Atlantic - A family-level study. Deep Sea Research I, 75: 175–186. http://dx.doi.org/10.1016/j.dsr.2012.12.007

Lapham, L., R. Wilson, M. Riedel, C.K. Paull, and M.E. Holmes. 2013. Temporal variability of in situ methane concentrations in gas hydrate-bearing sediments near Bullseye Vent, Northern Cascadia Margin. Geochemistry, Geophysics, Geosystems, 14: 2445–2459. http://dx.doi.org/10.1002/ggge.20167

Madin, L.P., W.M. Hamner, S.H.D. Haddock, and G.I. Matsumoto. Scuba diving in blue water: A window on ecology and evolution in the epipelagic ocean. In Research and Discovery: The Revolution of Science through Scuba, edited by Lang, M.A., R.L. Marinelli, S.J. Roberts, and P.R. Taylor, 71–82. Washington, D.C., Smithsonian Institution Scholarly Press: 2013.

Martin, E.J., H. Thomas, D.W. Caress, and B.W. Hobson. 2013. Seafloor mapping and imaging efforts using AUVs. Proceedings of the 18th International Symposium on Unmanned Untethered Submersible Technology, Portsmouth, New Hampshire, 11–14 August 2013.

McEwen, R., and S.M. Rock. 2013. Stability criterion for a wall-following AUV. Proceedings of the 18th International Symposium on Unmanned Untethered Submersible Technology, Portsmouth, New Hampshire, 11–14 August 2013.

Messié, M., and F.P. Chavez. 2013. Physical-biological synchrony in the global ocean associated with recent variability in the central and western equatorial Pacific. Journal of Geophysical Research, 118: 3782–3794. http://dx.doi.org/10.1002/jgrc.20278

Monier, A., S. Sudek, N.M. Fast, and A.Z. Worden. 2013. Gene invasion in distant eukaryotic lineages: discovery of mutually exclusive genetic elements reveals marine biodiversity. ISME Journal, 7: 1764–1774. http://dx.doi.org/10.1038/ismej.2013.70

Ottesen, E.A., C.R. Young, J.M. Eppley, J.P. Ryan, F.P. Chavez, C.A. Scholin, and E.F. DeLong. 2013. Pattern and synchrony of gene expression among sympatric marine microbial populations. Proceedings of the National Academy of Sciences, 110: E488–E497. http://dx.doi.org/10.1073/pnas.1222099110

Pargett, D.M. 2013. Design and fabrication of a 1m titanium sphere for 4000m ocean depth. Proceedings of Marine Technology Society/Institute of Electrical and Electronics Engineers Oceans 2013, San Diego, 23–26 September 2013.

Pargett, D.M., S.D. Jensen, B.A. Roman, C.M. Preston, W. Ussler III, P.R. Girguis, R. Marin III, J.M. Birch, and C.A. Scholin. 2013. Deep water instrument for microbial identification, quantification, and archiving. Proceedings of Marine Technology Society/Institute of Electrical and Electronics Engineers Oceans '13, San Diego, 23–26 September 2013.

Pohlman, J.W., M. Riedel, J.E. Bauer, E.A. Canuel, C.K. Paull, L. Lapham, K.S. Grabowski, R.B. Coffin, and G.D. Spence. 2013. Anaerobic methane oxidation in low-organic content methane seep sediments. Geochimica et Cosmochimica Acta, 108: 184–201. http://dx.doi.org/10.1016/j.gca.2013.01.022

Radenac, M.H., M. Messié, F. Léger, and C. Bosc. 2013. A very oligotrophic zone observed from space in the equatorial Pacific warm pool. Remote Sensing of Environment, 134: 224–233. http://dx.doi.org/10.1016/j.rse.2013.03.007

Read, B.A., J. Kegel, M.J. Klute, A. Kuo, S.C. lefebvre, F. Maumus, C. Mayer, J. Miller, A. Monier, A. Salamov, J. Young, M. Aguilar, J.M. Claverie, S. Frickenhaus, K. Gonzalez, E.K. Herman, Y.C. lin, J. Napier, H. Ogata, A.F. Sarno, J. Shmutz, D. Schroeder, C. de Vargas, F. Verret, P. von Dassow, K. Valentin, Y. Van de Peer, G. Wheeler, Emiliania huxleyi Annotation Consortium, J.B. dacks, C.F. Delwiche, S.T. dyhrman, G. Glockner, U. John, T. Richards, A.Z. Worden, X. Zhang, and I.V. Grigoriev. 2013. Pan genome of the phytoplankton Emiliania underpins its global distribution. Nature, 499: 209–213. http://dx.doi.org/10.1038/nature12221

Ryan, J.F., K. Pang, C.E. Schnitzler, A.D. Nguyen, R.T. Moreland, D.K. Simmons, B.J. Koch, W.R. Francis, P. Havlak, NISC Comparative Sequencing Program, S.A. Smith, N.H. Putnam, S.H.D. Haddock, C.W. Dunn, T.G. Wolfsberg, J.C. Mullikin, M.Q. Martindale, and A.D. Baxevanis. 2013. The genome of the ctenophore Mnemiopsis leidyi and its implications for cell type evolution. Science, 342: 1336–1344. http://dx.doi.org/10.1126/science.1242592

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