Aguilar Pérez, M. I., P. A. Zapata-Ramírez, and A. Micallef. 2024. A review of cold seeps in the Western Atlantic, focusing on Colombia and the Caribbean. Frontiers in Marine Science, 11(1430377). https://doi.org/10.3389/fmars.2024.1430377
Ahuja, N., X. Cao, D. T. Schultz, N. Picciani, A. Lord, S. Shao, K. Jia, D. R. Burdick, S. H. Haddock, Y. Li, and C. W. Dunn. 2024. Giants among Cnidaria: Large Nuclear Genomes and Rearranged Mitochondrial Genomes in Siphonophores. Genome Biology and Evolution, 16(3). https://doi.org/10.1093/gbe/evae048
Angelopoulos, M., and C.K. Paull. 2024. Subarctic permafrost formation around seafloor seeps. Nature Geoscience, 17(10): 956–957. https://doi.org/10.1038/s41561-024-01549-4
Barnard, K., J. Daniels, P. L. Roberts, E. C. Orenstein, I. Masmitja, J. Takahashi, B. Woodward, and K. Katija. 2024. DeepSTARia: Enabling autonomous, targeted observations of ocean life in the deep sea. Frontiers in Marine Science, 11(1357879). https://doi.org/10.3389/fmars.2024.1357879
Beckmann, L.M., B.A. Vincent, A. De León, J. Masterman, E.S. Lau, and S.H. Haddock. 2024. Fluorescence patterns and diversity of hydrozoans from Bocas del Toro, Panama. Ciencias Marinas, 50. https://doi.org/10.7773/cm.y2024.3409
Benoit-Bird, K. J. 2024. Resource Patchiness as a Resolution to the Food Paradox in the Sea. The American Naturalist, 203(1): 1-13. https://doi.org/10.1086/727473
Bessho-Uehara, M., J. Mallefet, and S.H. Haddock. 2024. Glowing sea cucumbers: Bioluminescence in the Holothuroidea. The World of Sea Cucumbers, 361-375. https://doi.org/10.1016/B978-0-323-95377-1.00003-5
Bif, M.B., J.S. Long, K.S. Johnson. 2024. Seasonality modulates particulate organic carbon dynamics in mid-latitudes of South Pacific and South Atlantic Oceans. Journal of Marine Systems, 241(103916). https://doi.org/10.1016/j.jmarsys.2023.103916
Burns, J.A., J. Daniels, K.P. Becker, D. Casagrande, P. Roberts, E. Orenstein, D.M. Vogt, Z.E. Teoh, R. Wood, A.H. Yin, B. Genot, R.J. Wood, K. Katija, B.T. Phillips, and D.F. Gruber. 2024. Transcriptome sequencing of seven deep marine invertebrates. Scientific Data, 11(1): 1–6. https://doi.org/10.1038/s41597-024-03533-4
Burns, J.A., K. P. Becker, D. Casagrande, J. Daniels, P. Roberts, E. Orenstein, D. M. Vogt, Z. E. Teoh, R. Wood, A.H. Yin, B. Genot, D.F. Gruber, K. Katija, R.J. Wood, B.T. Phillips. 2024. An in situ digital synthesis strategy for the discovery and description of ocean life. Science Advances, 10(eadj4960). doi.org/10.1126/sciadv.adj4960
Carranza, M.M., M.C. Long, A. Di Luca, A.J. Fassbender, K.S. Johnson, Y. Takeshita, P. Mongue, and K.E. Turner. 2024. Extratropical storms induce carbon outgassing over the Southern Ocean. Npj Climate and Atmospheric Science, 7(1): 1–16. https://doi.org/10.1038/s41612-024-00657-7
Carter, B. R., J. D. Sharp, A. G. Dickson, M. Álvarez, M. B. Fong, M. I. García-Ibáñez, R. J. Woosley, Y. Takeshita, L. Barbero, R. H. Byrne, J. Cai, M. Chierici, S. L. Clegg, R. A. Easley, A. J. Fassbender, K. L. Fleger, X. Li, M. Martín-Mayor, K. M. Schockman, and Z.A. Wang. 2024. Uncertainty sources for measurable ocean carbonate chemistry variables. Limnology and Oceanography, 69(1):1–21. https://doi.org/10.1002/lno.12477
Claes, J. M., S. H. Haddock, C. Coubris, and J. Mallefet. 2024. Systematic Distribution of Bioluminescence in Marine Animals: A Species-Level Inventory. Life, 14(4). https://doi.org/10.3390/life14040432
De Biase, M., F. Chidichimo, A. T. Thomas, and A. Micallef. 2024. Limited role of present-day onshore freshwater recharge in the emplacement of offshore freshened groundwater in the Canterbury Bight, New Zealand. New Zealand Journal of Geology and Geophysics, 1–15. https://doi.org/10.1080/00288306.2024.2387642
DeLeo D.M., M. Bessho-Uehara, S.H.D. Haddock, C.S. McFadden, and A.M. Quattrini. 2024. Evolution of bioluminescence in Anthozoa with emphasis on Octocorallia. Proceedings of the Royal Society B, 291(2021): 0232626. http://doi.org/10.1098/rspb.2023.2626
Dodson, S., W.K. Oestreich, M.S. Savoca, E.L. Hazen, S.J. Bograd, J.P. Ryan, J. Fiechter, and B. Abrahms. 2024. Long-distance communication can enable collective migration in a dynamic seascape. Scientific Reports, 14(1): 1–12. https://doi.org/10.1038/s41598-024-65827-2
Estapa, M. L., C. A. Durkin, W. H. Slade, C. L. Huffard, S. P. O'Neill, and M. M. Omand. 2024. A new, global optical sediment trap calibration. Limnology and Oceanography: Methods, 22(2): 77–92. https://doi.org/10.1002/lom3.10592
Gaynor, K.M., B. Abrahms, K.R. Manlove, W.K. Oestreich, and J.A. Smith. 2024. Anthropogenic impacts at the interface of animal spatial and social behaviour. Philosophical Transactions of the Royal Society B, 379(1912). http://doi.org/10.1098/rstb.2022.0527e
Haddock, S.H.D. and C.A. Choy. Life in the midwater: The ecology of deep pelagic animals. 2024. Annual Review of Marine Science, 16(1): 383–416. https://doi.org/10.1146/annurev-marine-031623-095435
Hetherington, E.D., H.G. Close, S.H.D. Haddock, A. Damian-Serrano, C.W. Dunn, N.J. Wallsgrove, S.C. Doherty, and A.C. Choy. 2024. Vertical trophic structure and niche partitioning of gelatinous predators in a pelagic food web: Insights from stable isotopes of siphonophores. Limnology and Oceanography, 69(4): 902–919. https://doi.org/10.1002/lno.12536
Hosia, A., L. Martell, M. K. Mańko, S. H. Haddock, D. Haberlin, and G. M. Mapstone. 2024. Unexpected diversity and novel lineages in the cosmopolitan genus Nanomia (Cnidaria: Siphonophorae: Physonectae). Frontiers in Marine Science, 11(1421514). https://doi.org/10.3389/fmars.2024.1421514
Hoving, J.T., S.H.D. Haddock, B.H. Robison, and B.A. Seibel. 2024. Giant eggs in a deep-sea squid. Ecology, 105(7): e4319. https://doi.org/10.1002/ecy.4319
Jessop, A.-L., Z.M. Bagheri, J.C. Partridge, K.J. Osborn, and J.M. Hemmi. 2024. Functional differences between the extraordinary eyes of deep-sea hyperiid amphipods. Proceedings of the Royal Society B, 291(2023): 29120240239. https://doi.org/10.1098/rspb.2024.0239
Julià-Miralles, M., I. Yarbuh, R.M. Spelz, R. Negrete-Aranda, J. Contreras, J.M. Fletcher, A. González-Fernández, R. Zierenberg, D.W. Caress. 2024. Strain localization instabilities and the genesis of multiple axes of seafloor spreading in the Carmen basin, southern Gulf of California. International Journal of Earth Sciences, 113:1265–1283. https://doi.org/10.1007/s00531-024-02426-6
Kelly, R.P., D.M. Lodge, K.N. Lee, S. Theroux, A.J. Sepulveda, C.A. Scholin, J.M. Craine, E.A. Allan, K.M. Nichols, K.M. Parsons, K.D. Goodwin, Z. Gold, F.P. Chavez, R.T. Noble, C.L. Abbott, M.R. Baerwald, A.M. Naaum, P.M. Thielen, A.L. Simons, C.L. Jerde, J.J. Duda, M.E. Hunter, J.A. Hagan, R.S. Meyer, J.A. Steele, M.Y. Stoeckle, H.M. Bik, C.P. Meyer, E. Stein, K.E. James, A.C. Thomas, E. Demir-Hilton, M.A. Timmers, J.F. Griffith, M.J. Weise, and S.B. Weisberg. 2024. Toward a national eDNA strategy for the United States. Environmental DNA, 6(1): e432. https://doi.org/10.1002/edn3.432
Laget, M., L. Drago, T. Panaïotis, R. Kiko, L. Stemmann, A. Rogge, N. Llopis-Monferrer, A. Leynaert, J.-O. Irisson, and T. Biard. 2024. Global census of the significance of giant mesopelagic protists to the marine carbon and silicon cycles. Nature Communications, 15(1): 1–11. https://doi.org/10.1038/s41467-024-47651-4
Lønborg, C., C. Carreira, S. Abril, S. Agustí, …, M.B. Bif, ..., X.A. Álvarez-Salgado. 2024. A Global dataset of dissolved organic matter (DOM) measurements in coastal waters (CoastDOM v1). Earth System Science Data, 16(2). DOI: 10.5194/essd-2023-348
Lundsten, E., C.K. Paull, R. Gwiazda, S. Dobbs, D.W. Caress, L.A. Kuhnz, M. Walton, N. Nieminski, M. McGann, T. Lorenson, G. Cochrane, and J. Addison. 2024. Pockmarks offshore Big Sur, California provide evidence for recurrent, regional, and unconfined sediment gravity flows. Journal of Geophysical Research: Earth Surface, 129(5): e2023JF007374. https://doi.org/10.1029/2023JF007374
Micallef, A., J. Geldmacher, S.F. Watt, G.M. Ferrante, J. Ford, E. Lodolo, D. Civile, A.G. Hodgetts, M. Felgendreher, J.G. Licari, F. Hauff, S. Hauff, J. Lang, K. Meredew, M. Portnyagin, C. Timm, C. Berndt, D. Cavallaro, F. Muccini, and K. Hoernle. 2024. Submarine volcanism in the Sicilian Channel revisited. Marine Geology, 474(107342). https://doi.org/10.1016/j.margeo.2024.107342
Muñoz, B. and G. Troni. 2024. Learning the Ego-Motion of an Underwater Imaging Sonar: A Comparative Experimental Evaluation of Novel CNN and RCNN Approaches. IEEE Robotics and Automation Letters, 9(3): 2072-2079. doi: 10.1109/LRA.2024.3352357
Oestreich, W. K., R. Y. Oliver, M. S. Chapman, M. C. Go, and M. F. McKenna. 2024. Listening to animal behavior to understand changing ecosystems. Trends in Ecology & Evolution, 39(10):961-973. https://doi.org/10.1016/j.tree.2024.06.007
Oestreich, W.K., K.J. Benoit-Bird, B. Abrahms, T. Margolina, J.E. Joseph, Y. Zhang, C.A. Rueda, and J.P. Ryan. 2024. Evidence for seasonal migration by a cryptic top predator of the deep sea. Movement Ecology, 12(65):1-14. https://doi.org/10.1186/s40462-024-00500-x
Paull, C. K., J. K. Hong, D. W. Caress, R. Gwiazda, H. Kim, E. Lundsten, J. B. Paduan, Y. K. Jin, M. J. Duchesne, T. S. Rhee, V. Brake, J., Obelcz, and M.A.L. Walton. 2024. Massive Ice Outcrops and Thermokarst Along the Arctic Shelf Edge: By-Products of Ongoing Groundwater Freezing and Thawing in the Sub-Surface. Journal of Geophysical Research: Earth Surface, 129(10). https://doi.org/10.1029/2024JF007719
Peña-Salinas, M.E., D.R. Speth, D.R. Utter, R.M. Spelz, S. Lim, R. Zierenberg, D.W. Caress, P.G. Núñez, R. Vázquez, V.J. Orphan. 2024. Thermotogota diversity and distribution patterns revealed in Auka and JaichMaa ‘ja ‘ag hydrothermal vent fields in the Pescadero Basin, Gulf of California. PeerJ, 12(e17724) https://doi.org/10.7717/peerj.17724
Preston, C., K. Yamahara, D. Pargett, C. Weinstock, J. Birch, B. Roman, S. Jensen, B. Connon, R. Jenkins,J. Ryan, and C. Scholin. 2024. Autonomous eDNA collection using an uncrewed surface vessel over a 4200-km transect of the eastern Pacific Ocean. Environmental DNA, 6(1). https://doi.org/10.1002/edn3.468
Robison, B.H. and S.H.D. Haddock. 2024. Discovery and description of a remarkable bathypelagic nudibranch, Bathydevius caudactylus, gen. et. sp. nov. Deep Sea Research Part I: Oceanographic Research Papers, 214: 104414. https://doi.org/10.1016/j.dsr.2024.104414
Sato, M. and K. J. Benoit-Bird. 2024. Diel Vertical Migrators Respond to Short-Term Upwelling Events. Geophysical Research Letters, 51(2). https://doi.org/10.1029/2023GL105387
Slead, S. R., M. Wei, S. L. Nooner, W. W. Chadwick, D. W. Caress, and J. Beeson. 2024. Compartmentalization of Axial Seamount's Magma Reservoir Inferred by Analytical and Numerical Deformation Modeling With Realistic Geometry. Journal of Geophysical Research: Solid Earth, 129(5). https://doi.org/10.1029/2023JB028414
Stephens, B. M., C. A. Durkin, G. Sharpe, T. T. Nguyen, J. Albers, M. L. Estapa, D. K. Steinberg, N. M. Levine, S. M. Gifford, C. A. Carlson, P. W. Boyd, and A. E. Santoro. 2024. Direct observations of microbial community succession on sinking marine particles. The ISME Journal, 18(1). https://doi.org/10.1093/ismejo/wrad010
Thorne, K. M., G. M. MacDonald, F. P. Chavez, R. F. Ambrose, and P.L. Barnard. 2024. Significant challenges to the sustainability of the California coast considering climate change. Proceedings of the National Academy of Sciences, 121(32). https://doi.org/10.1073/pnas.2310077121
Ussler, W., G. J. Doucette, C. M. Preston, C. Weinstock, N. Allaf, B. Roman, S. Jensen, K. Yamahara, L. A. Lingerfelt, C. M. Mikulski, B. W. Hobson, B. Kieft, Y. Raanan, Y. Zhang, R. M. Errera, S. A. Ruberg, P. A. Den Uyl, K. D. Goodwin, S. D. Soelberg, C.E. Furlong, J. M. Birch, and C.A. Scholin. 2024. Underway measurement of cyanobacterial microcystins using a surface plasmon resonance sensor on an autonomous underwater vehicle. Limnology and Oceanography: Methods, 22(9): 681-699. https://doi.org/10.1002/lom3.10627
Winnikoff, J. R., D. Milshteyn, S. J. Vargas-Urbano, M. A. Pedraza-Joya, A. M. Armando, O. Quehenberger, A. Sodt, R. E Gillilan, E. A. Dennis, E. Lyman, S. H. D. Haddock, and I. Budin. 2024. Homeocurvature adaptation of phospholipids to pressure in deep-sea invertebrates. Science, 384(6703). https://doi.org/adm7607
Wirth, T., Y. Takeshita, B. Davis, E. Park, I. Hu, C. L. Huffard, K. S. Johnson, D. Nicholson, C. Staudinger, J. K. Warren, and T. Martz. 2024. Assessment of a pH optode for oceanographic moored and profiling applications. Limnology and Oceanography: Methods, 22(11): 805-822. https://doi.org/10.1002/lom3.10646
Zhang, Y., B. Kieft, B. W. Hobson, Q. Shemet, C. M. Preston, C. Wahl, K. J. Pitz, K. J. Benoit-Bird, J. M. Birch, F. P. Chavez, and C. A. Scholin. 2024. Coordinated and Collaborative Sampling by Two Long-Range Autonomous Underwater Vehicles. IEEE Journal of Oceanic Engineering, 49(4):1371-1382. https://doi.org/10.1109/JOE.2024.3408889
Zhang, Y., B. Kieft, B. W. Hobson, Y. Raanan, W. Ussler, C. M. Preston, R. M. Errera, P. A. Den Uyl, A. V. Woude, G. J. Doucette, S. A. Ruberg, K. D. Goodwin, J. M. Birch, and C.A. Scholin. 2024. Using a long-range autonomous underwater vehicle to find and sample harmful algal blooms in Lake Erie. Limnology and Oceanography: Methods, 22(7): 473-483. https://doi.org/10.1002/lom3.10621
Zhang, Y., B. W. Hobson, B. Kieft, M. A. Godin, T. Ravens, and M. Ulmgren. 2024. Adaptive Zigzag Mapping of a Patchy Field by a Long-Range Autonomous Underwater Vehicle. IEEE Journal of Oceanic Engineering, 49(2):403-415. https://doi.org/10.1109/JOE.2023.3338694
Zilliacus, K. M., J. O’Sullivan, F. Galvan-Magna, M. K. McKinzie, and D.A. Croll. 2024. A biologging database of mobulid rays from the Gulf of California, Mexico. Scientific Data, 11(1): 1-6. https://doi.org/10.1038/s41597-023-02874-w
Arnoldi, N. S., S. Y. Litvin, D. J. Madigan, F. Micheli, and A. Carlisle. 2023. Multi-taxa marine isoscapes provide insight into large-scale trophic dynamics in the North Pacific. Progress in Oceanography, 213(103005). https://doi.org/10.1016/j.pocean.2023.103005
Barlow, D.R., K.C. Bierlich, W.K. Oestreich, G. Chiang, J.W. Durban, J.A. Goldbogen, D.W. Johnston, M.S. Leslie, M.J. Moore, J.P. Ryan, L.G. Torres. 2023. Shaped by their environment: Variation in blue whale morphology across three productive coastal ecosystems. Integrative Organismal Biology, 5(1). https://doi.org/10.1093/iob/obad039
Barry, J.P., S.Y. Litvin, A. DeVogelaere, D.W. Caress, C.F. Lovera, A.S. Kahn, E.J. Burton, C. King, J.B. Paduan, C.G. Wheat, F. Girard, S. Sudek, A.M. Hartwell, A.D. Sherman, P.R. McGill, A. Schnittger, J.R. Voight, and E.J. Martin. 2023. Abyssal hydrothermal springs—Cryptic incubators for brooding octopus. Science Advances, 9(34): 1–13. science.org/doi/10.1126/sciadv.adg3247
Belcher, B. T., E. H. Bower, B. Burford, M. R. Celis, A. K. Fahimipour, I. L. Guevara, K. Katija, Z. Khokhar, A. Manjunath, S. Nelson, S. Olivetti, E. Orenstein, M. H. Saleh, B. Vaca, S. Valladares, S. A. Hein, and A.M. Hein. 2023. Demystifying image-based machine learning: A practical guide to automated analysis of field imagery using modern machine learning tools. Frontiers in Marine Science, 10(1157370). https://doi.org/10.3389/fmars.2023.1157370
Benoit-Bird, K. 2023. Vertical migration of the ocean’s deep scattering layer affects the health of the planet. The Journal of the Acoustical Society of America, 153(3). https://doi.org/10.1121/10.0018167
Benoit-Bird, K.J., C.M. Waluk, E.J. Martin, K.R. Reisenbichler, R.E. Sherlock, P.R. McGill, and B.H. Robison. 2023. Schrödinger's fish: Examining the robotic observer effect on pelagic animals. Limnology and Oceanography: Methods, 21(9): 563–580. https://doi.org/10.1002/lom3.10565
Bergamasco, A., E. Camatti, M. Messié, and Y. Deng. 2023. Editorial: Ocean-biota system: Integrated approach to climate change impacts on plankton communities in coastal and pelagic environments. Frontiers in Marine Science, 10. https://doi.org/10.3389/fmars.2023.1296237
Berman, G.H., S.B. Johnson, C.A. Seid, R.C. Vrijenhoek, and G.W. Rouse. 2023. Range extensions of Pacific bone-eating worms (Annelida, Siboglinidae, Osedax). Biodiversity Data Journal 11(e102803): 1–18. https://doi.org/10.3897/BDJ.11.e102803
Bresnahan, P., E. Briggs, B. Davis, A. R. Rodriguez, L. Edwards, C. Peach, N. Renner, H. Helling, and M. Merrifield. 2023. A Low-Cost, DIY Ultrasonic Water Level Sensor for Education, Citizen Science, and Research. Oceanography, 36(1):51-58. https://doi.org/10.5670/oceanog.2023.101
Brewer, P.G. 2023. David Packard—Engineer, Builder, Statesman, Philanthropist—and Mentor. Molecular Frontiers Journal, 7(Supp02): 105-107. https://doi.org/10.1142/S2529732523500104
Brewer, P.G., E.T. Peltzer, and K. Lage. 2023. The molecular ocean. Molecular Frontiers Journal. DOI:10.1142/ S2529732523400047
Chen, C., H. K. Watanabe, K. Gena, and S.B. Johnson. 2023. Anatomical shifts linked with unusual diets in deep‐sea snails. Ecology, 104(1). https://doi.org/10.1002/ecy.3847
Crosby, A., E.C. Orenstein, S.E. Poulton, K.L.C. Bell, B. Woodward, H. Ruhl, K. Katija, A.G. Forbes. 2023. Designing Ocean Vision AI: An investigation of community needs for imaging-based ocean conservation. In CHI '23: Proceedings of the 2023 CHI Conference on Human Factors in Computing Systems, Hamburg, Germany, April 2023. 1–16. https://doi.org/10.1145/3544548.3580886
Daniels J., G. Sainz, K. Katija. 2023. New method for rapid 3D reconstruction of semi-transparent underwater animals and structures. Integrative and Comparative Biology, 5(1): 1-12. https://doi.org/10.1093/iob/obad023
Dobbs, S.C., C.K. Paull, E.M. Lundsten, R. Gwiazda, D.W. Caress, M. McGann, M.M. Coholich, M.A. Walton, N.M. Nieminski, T. McHargue, and S.A. Graham. 2023. Sediment gravity flow frequency offshore central California diminished significantly following the Last Glacial Maximum. Frontiers in Marine Science, 10(1099472): 1–12. https://doi.org/10.3389/fmars.2023.1099472
Donham, E. M., I. Flores, A. Hooper, E. O’Brien, K. Vylet, Y. Takeshita, J. Freiwald, and K. J. Kroeker. 2023. Population-specific vulnerability to ocean change in a multistressor environment. Science Advances, 9(3). https://doi.org/10.1126/sciadv.ade2365
Girard, F., S.Y. Litvin, A. Sherman, P. McGill, C. Lovera, A. DeVogelaere, E. Burton, and J.P. Barry. 2023. Epibenthic faunal community dynamics and seasonal species turnover in a deep-sea coral ecosystem. Deep Sea Research Part I: Oceanographic Research Papers, 196(104048): 1–10. https://doi.org/10.1016/j.dsr.2023.104048
Gonzalez, B.C., V.L. González, A. Martínez, K. Worsaae, and K.J. Osborn. 2023. A transcriptome-based phylogeny for Polynoidae (Annelida: Aphroditiformia). Molecular Phylogenetics and Evolution, 185(107811). https://doi.org/10.1016/j.ympev.2023.107811
Graham, K.A., C.D. Holmes, G. Friedrich, C.D. Rauschenberg, C.R. Williams, J.W. Bottenheim, F.P. Chavez, J.W. Halfacre, D.K. Perovich, P.B. Shepson, W.R. Simpson, and P.A. Matrai. 2023. Variability of atmospheric CO2 over the Arctic Ocean: Insights from the O-Buoy Chemical Observing Network. Journal of Geophysical Research: Atmospheres, 128(6): e2022JD036437. https://doi.org/10.1029/2022JD036437
Hin, V., A.M. de Roos, K.J. Benoit-Bird, D.E. Claridge, N. DiMarzio, J.W. Durban, E.A. Falcone, E.K. Jacobson, C.M. Jones-Todd, E. Pirotta, G.S. Schorr, L. Thomas, S. Watwood, and J. Harwood. 2023. Using individual-based bioenergetic models to predict the aggregate effects of disturbance on populations: A case study with beaked whales and Navy sonar. PLOS ONE, 18(8): e0290819. https://doi.org/10.1371/journal.pone.0290819
Hoffmann, J.J., J.J. Mountjoy, E. Spain, M. Gall, L.W. Tait, Y. Ladroit, and A. Micallef. 2023. Fresh submarine groundwater discharge offshore Wellington (New Zealand): Hydroacoustic characteristics and its influence on seafloor geomorphology. Frontiers in Marine Science, 10(1204182): 1–14. https://doi.org/10.3389/fmars.2023.1204182
Hong, J.K., V.I. Brake, Y. Choi, and C.K. Paull. ARA13C cruise report: 2022 Korea-Canada-USA Beaufort Sea Research Program. Natural Resources Canada, Geological Survey of Canada, Open File 8976, 2023. https://doi.org/10.4095/331924
Johnson, K.S, J.N. Plant, T.L. Maurer, and Y. Takeshita. 2023. Processing BGC-Argo pH data at the DAC level. Argo Data Management. https://doi.org/10.13155/57195
Johnson, K.S., J.N. Plant, T.L. Maurer, and Y. Takeshita. 2023. BGC-Argo quality control manual for pH. https://doi.org/10.13155/97828
Katija, K. 2023. Autonomous agents for observing marine life. Science Robotics, 8(80). https://doi.org/10.1126/scirobotics.adi6428
Kim, EB, K.E. Frasier, M.F. McKenna, A.C.M. Kok, L.E. Peavey-Reeves, W.K. Oestreich, G. Arrieta, S. Wiggins, and S. Baumann-Pickering. 2023. SoundScape Learning: an automatic method for separating fish chorus in marine soundscapes. Journal of the Acoustical Society of America, 153(3): 1710-1722. https://doi.org/10.1121/10.0017432
Kroeker, K.J., E.M. Donham, K. Vylet, J.K. Warren, J. Cheresh, J. Fiechter, J. Freiwald, and Y. Takeshita. 2023. Exposure to extremes in multiple global change drivers: Characterizing pH, dissolved oxygen, and temperature variability in a dynamic, upwelling dominated ecosystem. Limnology and Oceanography, 68(7): 1611–1623. https://doi.org/10.1002/lno.12371
Lipparini, L., D. Chiacchieri, R. Bencini, and A. Micallef. 2023. Extensive freshened groundwater resources emplaced during the Messinian sea-level drawdown in southern Sicily, Italy. Communications Earth & Environment, 4(1): 1-13. https://doi.org/10.1038/s43247-023-01077-w
Masmitja, I., M. Martin, T. O'Reilly, B. Kieft, N. Palomeras, J. Navarro, and K. Katija. 2023. Dynamic robotic tracking of underwater targets using reinforcement learning. Science Robotics, 8(80). https://doi.org/10.1126/scirobotics.ade7811
Masmitja, I., M. Martin, T. O’Reilly, N. Palomeras, K. Katija and J. Navarro. 2023. Platform-portable reinforcement learning methods to localize underwater targets. In OCEANS 2023 - Limerick, Limerick, Ireland, 2023, 1-6, doi: 10.1109/OCEANSLimerick52467.2023.10244488.
McDermott, S., A. DeVogelaere, J. Barry, and A.S. Kahn. 2023. Effects of a Lost Shipping Contain in the Deep Sea. National Marine Sanctuaries Conservation Series: ONMS-023-05. https://doi.org/10.25923/57a1-q985
Messié, M., R.E. Sherlock, C.L. Huffard, J.T. Pennington, C.A. Choy, R.P. Michisaki, K. Gomes, F.P. Chavez, B.H. Robison, and K.L. Smith, Jr. 2023. Coastal upwelling drives ecosystem temporal variability from the surface to the abyssal seafloor. Proceedings of the National Academy of Sciences, 120(13): e2214567120. https://doi.org/10.1073/pnas.2214567120
Meyer, R., N. Davies, K.J. Pitz, C. Meyer, R. Samuel, J. Anderson, W. Appeltans, K. Barker, F.P. Chavez, ... P.L. Buttigieg. 2023. The founding charter of the Omic Biodiversity Observation Network (Omic BON). GigaScience. 12(giad068). https://doi.org/10.1093/gigascience/giad068
Min, M.A., D.M. Needham, S. Sudek, N.K. Truelove, K.J. Pitz, G.M. Chavez, C. Poirier, B. Gardeler, E. von der Esch, A. Ludwig, U. Riebesell, A.Z. Worden, and F.P. Chavez. 2023. Ecological divergence of a mesocosm in an eastern boundary upwelling system assessed with multi-marker environmental DNA metabarcoding. Biogeosciences, 20(7): 1277–1298. https://doi.org/10.5194/bg-20-1277-2023
Notar, J.C., M.C. Go, and S. Johnsen. 2023. Learning without a brain: classical conditioning in the ophiuroid Ophiocoma echinata. Behavioral Ecology Sociobiology, 77(126). https://doi.org/10.1007/s00265-023-03402-x
Nowinski, B., X. Feng, C. M. Preston, J. M. Birch, H. Luo, W. B. Whitman, and M.A. Moran. 2023. Ecological divergence of syntopic marine bacterial species is shaped by gene content and expression. The ISME Journal, 17(6): 813-822. https://doi.org/10.1038/s41396-023-01390-4
Orenstein, E., K. Barnard, L. Lundsten, G. Patterson, B. Woodward, and K. Katija. 2023. The FathomNet2023 Competition Dataset. ArXiv. /abs/2307.08781
Pastoressa, A.E., A. Haroon, M.E. Everett, L. Rohde, T. Bartels, M. Wollatz-Vogt, Z. Faghih, G.K. Franz, and A. Micallef. 2023. SWAN: A surface-towed modular controlled-source electromagnetic system for mapping submarine groundwater discharge and offshore groundwater resources. The Leading Edge, 42(9): 590-597. DOI:10.1190/tle42090590.1
Pearson, E.J., W.K. Oestreich, J.P. Ryan, S.M. Haver, J. Gedamke, R.P. Dziak, and C.C. Wall. 2023. Widespread passive acoustic monitoring reveals spatio-temporal patterns of blue and fin whale song vocalizations in the Northeast Pacific Ocean. Frontiers in Remote Sensing, 4: 1–13. https://doi.org/10.3389/frsen.2023.994518
Pezner, A. K., T.A. Courtney, H.C. Barkley, W. Chou, H. Chu, S.M. Clements, T. Cyronak, M.D. DeGrandpre, S.A. Kekuewa, D.I. Kline, Y. Liang, T.R. Martz, S. Mitarai, H.N. Page, M.S. Rintoul, J.E. Smith, K. Soong, Y. Takeshita, M. Tresguerres, Y. Wei, K.K. Yates, and A.J. Andersson. 2023. Increasing hypoxia on global coral reefs under ocean warming. Nature Climate Change, 13(4): 403–409. https://doi.org/10.1038/s41558-023-01619-2
Plant, J.N., C.M. Sakamoto, K.S. Johnson, T.L. Maurer, and M.B. Bif. 2023. Updated temperature correction for computing seawater nitrate with in situ ultraviolet spectrophotometer and submersible ultraviolet nitrate analyzer nitrate sensors. Limnology and Oceanography: Methods, 21(10): 581–593. https://doi.org/10.1002/lom3.10566
Player, T. R., A. Chakravarty, M. M. Zhang, B. Yair Raanan, B. Kieft, Y. Zhang, and B. Hobson. 2023. From Concept to Field Tests: Accelerated Development of Multi-AUV Missions Using a High-Fidelity Faster-than-Real-Time Simulator. In 2023 IEEE International Conference on Robotics and Automation, London, United Kingdom, 2023, 3102-3108 https://doi.org/10.1109/ICRA48891.2023.10160447
Romanowicz, B. R. Allen, K. Brekke, L.-W. Chen, Y. Gou, I. Henson, J. Marty, D. Neuhauser, B. Pardini, T. Taira, S. Thompson, J. Zhang, and S. Zuzlewski. 2023. SeaFOAM: A year‐long DAS deployment in Monterey Bay, California. Seismological Research Letters. https://doi.org/10.1785/0220230047
Ruhl, H.A., B. J. Bett, J. Ingels, A. Martin, A.R Gates, A. Yool, M.A. Benoist, W. Appeltans, K.L. Howell, and R. Danovaro. 2023. Integrating ocean observations across body-size classes to deliver benthic invertebrate abundance and distribution information. Limnology and Oceanography Letters, 8(5): 692–706. https://doi.org/10.1002/lol2.10332
Sandoval-Belmar, M., J. Smith, A.R. Moreno, C. Anderson, R.M. Kudela, M. Sutula, F. Kessouri, D.A. Caron, F.P. Chavez, and D. Bianchi. 2023. A cross-regional examination of patterns and environmental drivers of Pseudo-nitzschia harmful algal blooms along the California coast. Harmful Algae, 126(102435). https://doi.org/10.1016/j.hal.2023.102435
Schultz, D.T., S.H. Haddock, J.V. Bredeson, R.E. Green, O. Simakov, and D.S. Rokhsar. 2023. Ancient gene linkages support ctenophores as sister to other animals. Nature: 1–8. https://doi.org/10.1038/s41586-023-05936-6
Shao, X., Y. Xu, W. Luo, W. Wang, Y. Huang, … M.B. Bif, ... Y. Luo. 2023. Global oceanic diazotroph database version 2 and elevated estimate of global oceanic N2 fixation. Earth System Science Data, 15(8): 3673-3709. https://doi.org/10.5194/essd-15-3673-2023
Stoer, A. C., Y. Takeshita, T. L. Maurer, C. Begouen Demeaux, H. C. Bittig, E. Boss, H. Claustre, C. Gordon, B.J. Greenan, K. S. Johnson, E. Organelli, R. Sauzède, C. M. Schmechtig, and K. Fennel. 2023. A census of quality-controlled Biogeochemical-Argo float measurements. Frontiers in Marine Science, 10. https://doi.org/10.3389/fmars.2023.1233289
Strock S, J.H. Costello, J. Daniels, K. Katija, and S.P. Colin. 2023. Nectophore coordination and kinematics by physonect siphonophores. Journal of Experimental Biology, 226(18): 1-9. https://doi.org/10.1242/jeb.245955
Thomas, A. T., A. Micallef, S. Duan, and Z. Zou. 2023. Characteristics and controls of an offshore freshened groundwater system in the Shengsi region, East China Sea. Frontiers in Earth Science, 11(1198215). https://doi.org/10.3389/feart.2023.1198215
Tzortzis, R., A.M. Doglioli, M. Messié, S. Barrillon, A.A. Petrenko, L. Izard, Y. Zhao, F. d’Ovidio, F. Dumas, and G. Gregori. 2023. The contrasted phytoplankton dynamics across a frontal system in the southwestern Mediterranean Sea. Biogeosciences, 20(16): 3491-3508. doi:10.5194/bg-20-3491-2023
Wolfson-Schwehr, M., C. Paull, D.W. Caress, R. Gwiazda, N.M. Nieminski, P.J. Talling, C. Carvajal, S. Simmons, and G. Troni. 2023. Time-lapse seafloor surveys reveal how turbidity currents and internal tides in Monterey Canyon interact with the seabed at centimeter-scale. Journal of Geophysical Research: Earth Surface, 128(4): e2022JF006705. https://doi.org/10.1029/2022JF006705
Wynn-Edwards, C.A., E. H. Shadwick, P. Jansen, C. Schallenberg, T. L. Maurer, and A. J. Sutton. 2023. Subantarctic pCO2 estimated from a biogeochemical float: Comparison with moored observations reinforces the importance of spatial and temporal variability. Frontiers in Marine Science, 10(1231953). https://doi.org/10.3389/fmars.2023.1231953