Messié, M., R.E. Sherlock, C.L. Huffard, J.T. Pennington, C.A. Choy, R.P. Michisaki, K. Gomes, F.P. Chavez, B.H. Robison, and K.L. Smith, Jr. 2023. Coastal upwelling drives ecosystem temporal variability from the surface to the abyssal seafloor. Proceedings of the National Academy of Sciences, 120(13): e2214567120. https://doi.org/10.1073/pnas.2214567120
Messié, M., A. Petrenko, A.M. Doglioli, E. Martinez, and S. Alvain. 2022. Basin-scale biogeochemical and ecological impacts of islands in the tropical Pacific Ocean. Nature Geoscience, 15: 469–474. https://doi.org/10.1038/s41561-022-00957-8
Messié, M., D.A. Sancho-Gallegos, J. Fiechter, J.A. Santora, and F.P. Chavez. 2022. Satellite-based Lagrangian Model reveals how upwelling and oceanic circulation shape krill hotspots in the California Current System. Frontiers in Marine Science, 9: 1–19. https://doi.org/10.3389/fmars.2022.835813
Kavanaugh, M. T., T. Bell, D. Catlett, M.A. Cimino, S.C. Doney, W. Klajbor, M. Messié, E. Montes, F.E. Muller-Karger, D. Otis, J.A. Santora, I.D. Schroeder, J. Triñanes, and D.A. Siegel. 2021. Satellite remote sensing and the Marine Biodiversity Observation Network (MBON): Current science and future steps. Oceanography, 34: 62–79. https://doi.org/10.5670/oceanog.2021.215
Santora, J.A., I.D. Schroeder, S.J. Bograd, F.P. Chavez, M.A. Cimino, J. Fiechter, E.L. Hazen, M.T. Kavanaugh, M. Messié, R.R. Miller, K.M. Sakuma, W.J. Sydeman, B.K. Wells, and J.C. Field. 2021. Pelagic biodiversity, ecosystem function, and services: An integrated observing and modeling approach. Oceanography, 34: 16–37. https://doi.org/10.5670/oceanog.2021.212
Fiechter, J., J. Santora, F.P. Chavez, D. Northcott, and M. Messié, 2020. Krill hotspot formation and phenology in the California Current Ecosystem. Geophysical Research Letters, 47(13): 1–10. https://doi.org/10.1029/2020GL088039
Messié, M., A. Petrenko, A.M. Doglioli, C. Aldebert, E. Martinez, G. Koenig, S. Bonnet, and T. Moutin. 2020. The delayed island mass effect: How islands can remotely trigger blooms in the oligotrophic ocean. Geophysical Research Letters, 47: 1–10. https://doi.org/10.1029/2019GL085282
Messié, M., I. Shulman, S. Martini, and S. Haddock. 2019. Using fluorescence and bioluminescence sensors to characterize auto- and heterotrophic plankton communities. Progress in Oceanography, 171: 76–92. https://doi.org/10.1016/j.pocean.2018.12.010
Smith Jr., K.L., H.A. Ruhl, C.L. Huffard, M. Messié, and M. Kahru. 2018. Episodic organic carbon fluxes from surface ocean to abyssal depths during long-term monitoring in NE Pacific. Proceedings of the National Academy of Sciences, 115: 12235–12240. https://doi.org/10.1073/pnas.1814559115
Chavez, F.P., J.T. Pennington, R.P. Michisaki, M. Blum, G.M. Chavez, J. Friederich, B. Jones, B. Herlien, B. Kieft, B. Hobson, A.S. Ren, J. Ryan, J.C. Sevadjian, C. Wahl, K.R. Walz, K. Yamahara, G.E. Friederich, and M. Messié. 2017. Climate variability and change: Response of a coastal ocean ecosystem. Oceanography, 30: 128–145. https://doi.org/10.5670/oceanog.2017.429
Haddock, S.H.D., L.M. Christianson, W.R. Francis, S. Martini, C.W. Dunn, P.R. Pugh, C.E. Mills, K.J. Osborn, B.A. Seibel, C.A. Choy, C.E. Schnitzler, G.I. Matsumoto, M. Messié, D.T. Schultz, J.R. Winnikoff, M.L. Powers, R. Gasca, W.E. Browne, S. Johnsen, K.L. Schlining, S. von Thun, B.E. Erwin, J.F. Ryan, and E.V. Thuesen. 2017. Insights into the biodiversity, behavior, and bioluminescence of deep-sea organisms using molecular and maritime technology. Oceanography, 30: 38–47. https://doi.org/10.5670/oceanog.2017.422. PDF.
Messié, M., and F.P. Chavez. 2017. Nutrient supply, surface currents, and plankton dynamics predict zooplankton hotspots in coastal upwelling systems. Geophysical Research Letters, 44: 8979–8986. http://dx.doi.org/10.1002/2017GL074322
Zhang, Yanwu, B. Kieft, M.J. Stanway, R.S. McEwen, B.W. Hobson, J.G. Bellingham, J.P. Ryan, T.C. O'Reilly, B.Y. Raanan, M. Messié, J.M. Smith, and F.P. Chavez. 2017. Isotherm tracking by an autonomous underwater vehicle in drift mode. IEEE Journal of Oceanic Engineering, 42: 808–817. http://dx.doi.org/10.1109/JOE.2016.2625058
Radenac, M.H., F. Léger, M. Messié, P. Dutrieux, C. Menkes, and G. Eldin. 2016. Wind-driven changes of surface current, temperature, and chlorophyll observed by satellites north of New Guinea. Journal of Geophysical Research: Oceans, 121: 2231–2252. http://dx.doi.org/10.1002/2015JC011438
Messié, M., and F.P. Chavez. 2015. Seasonal regulation of primary production in eastern boundary upwelling systems. Progress in Oceanography, 134: 1–18. http://dx.doi.org/10.1016/j.pocean.2014.10.011
Miljutin, D., M. Miljutina, and M. Messié. 2015. Changes in abundance and community structure of nematodes from the abyssal polymetallic nodule field, Tropical Northeast Pacific. Deep Sea Research Part I: Oceanographic Research Papers, 106: 126–135. http://dx.doi.org/10.1016/j.dsr.2015.10.009
Smith Jr, K., M. Messié, A. Sherman, C. Huffard, B. Hobson, H. Ruhl, and A. Boetius. 2015. "Navigating the uncertain future of global oceanic time series." EOS, 96: 28 October 2015. http://dx.doi.org/10.1029/2015eo038095
Ryan, J.P., M.A. McManus, R.M. Kudela, M.L. Artigas, J.G. Bellingham, F.P. Chavez, G. Doucette, D. Foley, M. Godin, J.B.J. Harvey, R. Marin III, M. Messié, C. Mikulski, T. Pennington, F. Py, K. Rajan, I. Shulman, Z. Wang, and Y. Zhang. 2014. Boundary influences on HAB phytoplankton ecology in a stratification-enhanced upwelling shadow. Deep Sea Research Part II: Topical Studies in Oceanography, 101: 63–79. http://dx.doi.org/10.1016/j.dsr2.2013.01.017
Gierach, M.M., M. Messié, T. Lee, K.B. Karnauskas, and M.H. Radenac. 2013. Biophysical responses near equatorial islands in the Western Pacific Ocean during El Niño/La Niña transitions. Geophysical Research Letters, 40: 5473–5479. http://dx.doi.org/10.1002/2013GL057828
Messié, M., and F.P. Chavez. 2013. Physical-biological synchrony in the global ocean associated with recent variability in the central and western equatorial Pacific. Journal of Geophysical Research, 118: 3782–3794. http://dx.doi.org/10.1002/jgrc.20278
Radenac, M.H., M. Messié, F. Léger, and C. Bosc. 2013. A very oligotrophic zone observed from space in the equatorial Pacific warm pool. Remote Sensing of Environment, 134: 224–233. http://dx.doi.org/10.1016/j.rse.2013.03.007
Santora, J.A., W.J. Sydeman, M. Messié, F. Chai, Y. Chao, S.A. Thompson, B.K. Wells, and F.P. Chavez. 2013. Triple check: Observations verify structural realism of an ocean ecosystem model. Geophysical Research Letters, 40: 1367–1372. http://dx.doi.org/10.1002/grl.50312
Das, J., F. Py, T. Maughan, T. O'Reilly, M. Messié, J. Ryan, G.S. Sukhatme, and K. Rajan. 2012. Coordinated sampling of dynamic oceanographic features with underwater vehicles and drifters. International Journal of Robotics Research, 31: 626–646. http://dx.doi.org/10.1177/0278364912440736
Messié, M., and F.P. Chavez. 2012. A global analysis of ENSO synchrony: The oceans' biological response to physical forcing. Journal of Geophyiscal Research, 117(C9): 1–19. http://dx.doi.org/10.1029/2012JC007938
Chavez, F.P., M. Messié, and J.T. Pennington. 2011. Marine primary production in relation to climate variability and change. Annual Review of Marine Science, 3: 227–260. http://dx.doi.org/10.1146/annurev.marine.010908.163917
Messié, M., and F.P. Chavez. 2011. Global modes of sea surface temperature variability in relation to regional climate indices. Journal of Climate, 24: 4314–4331. http://dx.doi.org/10.1175/2011JCLI3941.1
Cuvelier, M.L., A.E. Allen, A. Monier, J.P. McCrow, M. Messié, S.G. Tringe, T. Woyke, R.M. Welsh, T. Ishoey, J.H. Lee, B.J. Binder, C.L. DuPont, M. Latasa, C. Guigand, K.R. Buck, J. Hilton, M. Thiagarajan, E. Caler, B. Read, R.S. Lasken, F.P. Chavez, and A.Z. Worden. 2010. Targeted metagenomics and ecology of globally important uncultured eukaryotic phytoplankton. Proceedings of the National Academy of Sciences, 107: 14679–14684. http://dx.doi.org/10.1073/pnas.1001665107
Chavez, F.P., and M. Messié. 2009. A comparison of eastern boundary upwelling ecosystems. Progress in Oceanography, 83: 80–96. http://dx.doi.org/10.1016/j.pocean.2009.07.032
Messié, M., J. Ledesma, D.D. Kolber, R.P. Michisaki, D.G. Foley, and F.P. Chavez. 2009. Potential new production estimates in four eastern boundary upwelling ecosystems. Progress in Oceanography, 83: 151–158.